Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   H9S87_RS05405 Genome accession   NZ_CP060799
Coordinates   1127306..1127971 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain ONU 554     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1122306..1132971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H9S87_RS05380 (H9S87_05380) - 1122735..1123814 (+) 1080 WP_034663262.1 ABC transporter ATP-binding protein -
  H9S87_RS05385 (H9S87_05385) - 1123816..1124736 (+) 921 WP_034663259.1 ABC transporter ATP-binding protein -
  H9S87_RS05390 (H9S87_05390) - 1125171..1125749 (+) 579 WP_034663254.1 GNAT family N-acetyltransferase -
  H9S87_RS05395 (H9S87_05395) spxA 1125943..1126338 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  H9S87_RS05400 (H9S87_05400) - 1126378..1127043 (-) 666 WP_034663251.1 TerC family protein -
  H9S87_RS19425 - 1127219..1127339 (+) 121 Protein_1019 hypothetical protein -
  H9S87_RS05405 (H9S87_05405) mecA 1127306..1127971 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  H9S87_RS05410 (H9S87_05410) cls 1128057..1129577 (+) 1521 WP_034663247.1 cardiolipin synthase -
  H9S87_RS05415 (H9S87_05415) - 1129739..1130899 (+) 1161 WP_034663244.1 competence protein CoiA -
  H9S87_RS05420 (H9S87_05420) pepF 1131114..1132940 (+) 1827 WP_302621039.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=478415 H9S87_RS05405 WP_012009573.1 1127306..1127971(+) (mecA) [Bacillus pumilus strain ONU 554]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=478415 H9S87_RS05405 WP_012009573.1 1127306..1127971(+) (mecA) [Bacillus pumilus strain ONU 554]
ATGGAAATTGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGATCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTAGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAAGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAACGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774