Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   J1N58_RS07050 Genome accession   NZ_CP071697
Coordinates   1498759..1499241 (+) Length   160 a.a.
NCBI ID   WP_024381385.1    Uniprot ID   -
Organism   Streptococcus suis strain 1112S     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1493759..1504241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1N58_RS07020 (J1N58_07020) - 1493820..1494968 (+) 1149 WP_105096748.1 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase -
  J1N58_RS07025 (J1N58_07025) - 1495039..1496349 (-) 1311 WP_024377301.1 GntP family permease -
  J1N58_RS07030 (J1N58_07030) folK 1496371..1496865 (-) 495 WP_024418459.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  J1N58_RS07035 (J1N58_07035) folB 1496862..1497224 (-) 363 WP_012027113.1 dihydroneopterin aldolase -
  J1N58_RS07040 (J1N58_07040) folP 1497217..1498029 (-) 813 WP_105131082.1 dihydropteroate synthase -
  J1N58_RS07045 (J1N58_07045) folE 1498038..1498601 (-) 564 WP_099831482.1 GTP cyclohydrolase I FolE -
  J1N58_RS07050 (J1N58_07050) mutX 1498759..1499241 (+) 483 WP_024381385.1 8-oxo-dGTP diphosphatase Machinery gene
  J1N58_RS07055 (J1N58_07055) - 1499606..1500283 (-) 678 WP_024377296.1 DUF4956 domain-containing protein -
  J1N58_RS07060 (J1N58_07060) - 1500270..1501013 (-) 744 WP_207560217.1 polyphosphate polymerase domain-containing protein -
  J1N58_RS07065 (J1N58_07065) - 1501204..1501506 (+) 303 WP_023369992.1 hypothetical protein -
  J1N58_RS07070 (J1N58_07070) - 1501527..1501793 (-) 267 WP_014637821.1 DUF2087 domain-containing protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18540.89 Da        Isoelectric Point: 4.4960

>NTDB_id=478391 J1N58_RS07050 WP_024381385.1 1498759..1499241(+) (mutX) [Streptococcus suis strain 1112S]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=478391 J1N58_RS07050 WP_024381385.1 1498759..1499241(+) (mutX) [Streptococcus suis strain 1112S]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGCAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGCAAACTGGAACCCGGTGAAACACCGCAAGCCTGTG
CTATTCGAGAAGTCTTTGAAGAAACAGGGCTAACAGTCACCAAACACGCTCTAAAAGGAGTCATCACCTTTCCAGACTTT
ACTCCAAACACTGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGATCAAGTGCTCTCCAAACCAACCTGGGAAGGGGACAGACACTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGTTTCCGCTATGACGGGGACAAACTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775