Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   J1N58_RS02490 Genome accession   NZ_CP071697
Coordinates   501765..502541 (+) Length   258 a.a.
NCBI ID   WP_125065481.1    Uniprot ID   -
Organism   Streptococcus suis strain 1112S     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 496765..507541
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J1N58_RS02480 (J1N58_02480) - 499929..500091 (-) 163 Protein_439 transposase -
  J1N58_RS02485 (J1N58_02485) rlmD 500375..501727 (-) 1353 WP_100881190.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  J1N58_RS02490 (J1N58_02490) recX 501765..502541 (+) 777 WP_125065481.1 recombination regulator RecX Regulator
  J1N58_RS02495 (J1N58_02495) - 502617..503150 (+) 534 WP_024375910.1 DUF402 domain-containing protein -
  J1N58_RS02500 (J1N58_02500) - 503208..503525 (+) 318 WP_002942715.1 DUF960 domain-containing protein -
  J1N58_RS02505 (J1N58_02505) - 503625..504356 (+) 732 WP_002942716.1 GntR family transcriptional regulator -
  J1N58_RS02510 (J1N58_02510) - 504496..505206 (-) 711 WP_044688168.1 GntR family transcriptional regulator -
  J1N58_RS02515 (J1N58_02515) - 505428..507200 (+) 1773 WP_029173621.1 beta-galactosidase family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30470.11 Da        Isoelectric Point: 9.5101

>NTDB_id=478362 J1N58_RS02490 WP_125065481.1 501765..502541(+) (recX) [Streptococcus suis strain 1112S]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDVSYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELARKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDALIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=478362 J1N58_RS02490 WP_125065481.1 501765..502541(+) (recX) [Streptococcus suis strain 1112S]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTCAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGTGAG
TTATGTTGATAGCTATGTCCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGGCTGGCAGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGGTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGCCTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGCTTTA
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.581

100

0.368