Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IAE60_RS07815 Genome accession   NZ_CP060731
Coordinates   1723537..1723938 (+) Length   133 a.a.
NCBI ID   WP_162110591.1    Uniprot ID   -
Organism   Pseudoxanthomonas mexicana strain GTZY2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1718537..1728938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IAE60_RS07795 (IAE60_07795) - 1718635..1720680 (+) 2046 WP_187574447.1 ATP-dependent DNA helicase -
  IAE60_RS07800 (IAE60_07800) tsaB 1720723..1721463 (+) 741 WP_187574448.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  IAE60_RS07805 (IAE60_07805) - 1721473..1722348 (-) 876 WP_187574449.1 energy transducer TonB -
  IAE60_RS07810 (IAE60_07810) gshB 1722350..1723294 (-) 945 WP_187574450.1 glutathione synthase -
  IAE60_RS07815 (IAE60_07815) pilG 1723537..1723938 (+) 402 WP_162110591.1 twitching motility response regulator PilG Regulator
  IAE60_RS07820 (IAE60_07820) - 1723992..1724522 (+) 531 WP_162110615.1 chemotaxis protein CheW -
  IAE60_RS07825 (IAE60_07825) - 1724557..1726593 (+) 2037 WP_185895338.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14834.07 Da        Isoelectric Point: 7.1357

>NTDB_id=478143 IAE60_RS07815 WP_162110591.1 1723537..1723938(+) (pilG) [Pseudoxanthomonas mexicana strain GTZY2]
MTQNEGQAGGFHGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
NNQVFKSTPVIMLSSKDSLFDKARGRIVGSEQYLTKPFTREELLDAIRAHVST

Nucleotide


Download         Length: 402 bp        

>NTDB_id=478143 IAE60_RS07815 WP_162110591.1 1723537..1723938(+) (pilG) [Pseudoxanthomonas mexicana strain GTZY2]
ATGACGCAGAACGAAGGCCAGGCCGGTGGATTCCACGGCCTACGGGTCATGGTGATCGATGACTCGAAAACCATCCGCCG
CACCGCGGAGACCCTGCTCAAGCGGGAGGGTTGCGAAGTGGTGACCGCGACGGACGGGTTCGAGGCCCTGGCCAAGATCG
CGGACCAGCAGCCGCAGATCATCTTCGTGGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGTGCGCTGATCAAG
AACAACCAGGTGTTCAAGTCCACGCCGGTCATCATGCTGTCGTCCAAGGACAGCCTGTTCGACAAGGCGCGTGGGCGCAT
CGTCGGCTCGGAGCAGTACCTGACCAAGCCGTTCACGCGCGAGGAACTCCTCGACGCCATCCGCGCCCACGTCAGCACCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

93.233

0.699