Detailed information NTG0478119

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BKM86_RS05565
• Genome accession: NZ_CP071585
• Coordinates: 1073089..1074048 (+)
• Length: 319 a.a.
• NCBI ID: WP_002852903.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain GB26
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1068089..1079048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKM86_RS05540 (BKM86_05540)	neuB	1068588..1069628 (+)	1041	WP_032585995.1	N-acetylneuraminate synthase	-
BKM86_RS05545 (BKM86_05545)	neuC	1069625..1070743 (+)	1119	WP_052806166.1	UDP-N-acetylglucosamine 2-epimerase	-
BKM86_RS05550 (BKM86_05550)	-	1070740..1071405 (+)	666	WP_052806167.1	acylneuraminate cytidylyltransferase family protein	-
BKM86_RS05555 (BKM86_05555)	-	1071393..1072226 (+)	834	WP_002878819.1	CatB-related O-acetyltransferase	-
BKM86_RS05560 (BKM86_05560)	waaV	1072218..1073030 (-)	813	WP_002878817.1	glycosyltransferase family 2 protein	-
BKM86_RS05565 (BKM86_05565)	waaF	1073089..1074048 (+)	960	WP_002852903.1	lipopolysaccharide heptosyltransferase II	Regulator
BKM86_RS05570 (BKM86_05570)	gmhA	1074029..1074589 (-)	561	WP_002852775.1	D-sedoheptulose 7-phosphate isomerase	-
BKM86_RS05575 (BKM86_05575)	rfaE1	1074586..1075971 (-)	1386	WP_002852777.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BKM86_RS05580 (BKM86_05580)	rfaD	1075964..1076917 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
BKM86_RS05585 (BKM86_05585)	gmhB	1076934..1077479 (-)	546	Protein_1092	HAD family hydrolase	-
BKM86_RS05590 (BKM86_05590)	-	1077561..1077863 (+)	303	WP_002852762.1	cytochrome c	-
BKM86_RS05595 (BKM86_05595)	ccoS	1077886..1078092 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36766.44 Da
• Isoelectric Point: 10.4054

>NTDB_id=478119 BKM86_RS05565 WP_002852903.1 1073089..1074048(+) (waaF) [Campylobacter jejuni subsp. jejuni strain GB26]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=478119 BKM86_RS05565 WP_002852903.1 1073089..1074048(+) (waaF) [Campylobacter jejuni subsp. jejuni strain GB26]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95