Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H9K76_RS19260 Genome accession   NZ_CP060714
Coordinates   4251438..4251839 (-) Length   133 a.a.
NCBI ID   WP_187596907.1    Uniprot ID   A0A7G9RM16
Organism   Diaphorobacter ruginosibacter strain DSM 27467     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4246438..4256839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H9K76_RS19245 (H9K76_19245) - 4248195..4250465 (-) 2271 WP_187596904.1 methyl-accepting chemotaxis protein -
  H9K76_RS19250 (H9K76_19250) - 4250513..4251040 (-) 528 WP_187596905.1 chemotaxis protein CheW -
  H9K76_RS19255 (H9K76_19255) - 4251073..4251438 (-) 366 WP_187596906.1 response regulator -
  H9K76_RS19260 (H9K76_19260) pilG 4251438..4251839 (-) 402 WP_187596907.1 response regulator Regulator
  H9K76_RS19265 (H9K76_19265) - 4251889..4252062 (-) 174 WP_187596908.1 rubredoxin -
  H9K76_RS19270 (H9K76_19270) - 4252157..4253110 (+) 954 WP_187596909.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  H9K76_RS19275 (H9K76_19275) hemL 4253094..4254398 (+) 1305 WP_187596910.1 glutamate-1-semialdehyde 2,1-aminomutase -
  H9K76_RS19280 (H9K76_19280) - 4254586..4256334 (+) 1749 WP_187596911.1 alkaline phosphatase D family protein -
  H9K76_RS19285 (H9K76_19285) - 4256324..4256788 (-) 465 WP_246475161.1 c-type cytochrome -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14853.09 Da        Isoelectric Point: 5.8517

>NTDB_id=477980 H9K76_RS19260 WP_187596907.1 4251438..4251839(-) (pilG) [Diaphorobacter ruginosibacter strain DSM 27467]
MTTEANPTFKVLVVDDSNTIRRSAEIFLKQGGHDVLLADDGFDALSKINDFQPQLIFCDILMPKLDGYQTCAIIKRNAKY
ADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNMDQGVK

Nucleotide


Download         Length: 402 bp        

>NTDB_id=477980 H9K76_RS19260 WP_187596907.1 4251438..4251839(-) (pilG) [Diaphorobacter ruginosibacter strain DSM 27467]
TTGACTACAGAAGCAAATCCTACGTTCAAAGTGCTTGTTGTCGATGACAGCAACACCATTCGACGCAGCGCAGAAATCTT
TCTCAAGCAGGGTGGCCACGACGTGCTGCTGGCCGATGACGGTTTCGACGCGCTCTCGAAGATCAACGACTTTCAGCCGC
AATTGATTTTTTGCGACATTCTGATGCCCAAGCTCGATGGCTATCAGACATGCGCCATCATCAAGCGCAACGCGAAGTAC
GCTGACACGCCCGTGGTCATGCTGTCTTCCAAGGATGGTGTGTTCGACAAGGCGCGCGGCCGCATGGTCGGCTGTCAGGA
ATACCTCACCAAACCGTTTACAAAAGACCAGCTGCTGCAGGCTGTGCAGCAGTTCGGCAACATGGATCAAGGAGTTAAGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(11-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9RM16

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60

86.466

0.519