Detailed information NTG0477932

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q19_RS05510
• Genome accession: NZ_CP071581
• Coordinates: 1083522..1084481 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain R31
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078522..1089481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q19_RS05485 (J3Q19_05485)	neuB	1079021..1080061 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q19_RS05490 (J3Q19_05490)	neuC	1080058..1081176 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q19_RS05495 (J3Q19_05495)	-	1081173..1081838 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q19_RS05500 (J3Q19_05500)	-	1081826..1082659 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
J3Q19_RS05505 (J3Q19_05505)	waaV	1082651..1083463 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q19_RS05510 (J3Q19_05510)	waaF	1083522..1084481 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q19_RS05515 (J3Q19_05515)	gmhA	1084462..1085022 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q19_RS05520 (J3Q19_05520)	rfaE1	1085019..1086404 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q19_RS05525 (J3Q19_05525)	rfaD	1086397..1087350 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q19_RS05530 (J3Q19_05530)	gmhB	1087351..1087911 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q19_RS05535 (J3Q19_05535)	-	1087993..1088295 (+)	303	WP_002852762.1	cytochrome c	-
J3Q19_RS05540 (J3Q19_05540)	ccoS	1088318..1088524 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477932 J3Q19_RS05510 WP_002856368.1 1083522..1084481(+) (waaF) [Campylobacter jejuni strain R31]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477932 J3Q19_RS05510 WP_002856368.1 1083522..1084481(+) (waaF) [Campylobacter jejuni strain R31]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956