Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMBB_RS05100 Genome accession   NC_017505
Coordinates   958851..959312 (-) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis alpha710     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 953851..964312
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBB_RS05070 (NMBB_1060) - 953952..955508 (+) 1557 WP_002223591.1 TerC family protein -
  NMBB_RS05075 (NMBB_1061) surE 955525..956271 (+) 747 WP_012221833.1 5'/3'-nucleotidase SurE -
  NMBB_RS05080 (NMBB_1062) - 956527..957774 (+) 1248 WP_002219040.1 M23 family metallopeptidase -
  NMBB_RS05085 (NMBB_1064) - 957981..958463 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  NMBB_RS14095 (NMBB_1065) - 958616..958777 (-) 162 WP_002232730.1 hypothetical protein -
  NMBB_RS05100 (NMBB_1066) recX 958851..959312 (-) 462 WP_002216872.1 recombination regulator RecX Regulator
  NMBB_RS05105 (NMBB_1067) - 959381..960089 (-) 709 Protein_954 phosphoglycolate phosphatase -
  NMBB_RS05115 (NMBB_1068) - 960496..961761 (+) 1266 WP_002219042.1 Glu/Leu/Phe/Val dehydrogenase -
  NMBB_RS05120 (NMBB_1069) - 961819..962625 (-) 807 WP_014575297.1 DUF4198 domain-containing protein -
  NMBB_RS05125 (NMBB_1070) - 962970..963179 (+) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=47793 NMBB_RS05100 WP_002216872.1 958851..959312(-) (recX) [Neisseria meningitidis alpha710]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=47793 NMBB_RS05100 WP_002216872.1 958851..959312(-) (recX) [Neisseria meningitidis alpha710]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment