Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   NMBB_RS03770 Genome accession   NC_017505
Coordinates   720384..721382 (-) Length   332 a.a.
NCBI ID   WP_002219588.1    Uniprot ID   -
Organism   Neisseria meningitidis alpha710     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 715384..726382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBB_RS03750 (NMBB_0772) - 716762..717388 (-) 627 WP_002214161.1 phosphoribosylanthranilate isomerase -
  NMBB_RS03755 (NMBB_0773) greB 717447..717938 (-) 492 WP_002214159.1 transcription elongation factor GreB -
  NMBB_RS03760 (NMBB_0774) purF 718038..719582 (-) 1545 WP_002225492.1 amidophosphoribosyltransferase -
  NMBB_RS15480 (NMBB_0775) - 719727..719858 (-) 132 WP_256824360.1 hypothetical protein -
  NMBB_RS03765 (NMBB_0776) - 719894..720391 (-) 498 WP_002219589.1 CvpA family protein -
  NMBB_RS03770 (NMBB_0777) tpc 720384..721382 (-) 999 WP_002219588.1 cell division protein FtsN Machinery gene
  NMBB_RS03775 (NMBB_0778) folC 721395..722669 (-) 1275 WP_002219587.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  NMBB_RS03780 (NMBB_0779) - 722701..723141 (-) 441 WP_002219586.1 protein YgfX -
  NMBB_RS03785 (NMBB_0780) - 723146..723505 (-) 360 WP_002219585.1 hypothetical protein -
  NMBB_RS03790 (NMBB_0781) - 723578..724306 (-) 729 WP_002219584.1 amino acid ABC transporter ATP-binding protein -
  NMBB_RS03800 (NMBB_0783) rsmA 724479..725258 (-) 780 WP_002219583.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  NMBB_RS03805 (NMBB_0784) - 725455..726144 (+) 690 WP_002219582.1 hypothetical protein -

Sequence


Protein


Download         Length: 332 a.a.        Molecular weight: 35534.92 Da        Isoelectric Point: 10.1759

>NTDB_id=47782 NMBB_RS03770 WP_002219588.1 720384..721382(-) (tpc) [Neisseria meningitidis alpha710]
MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINERLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=47782 NMBB_RS03770 WP_002219588.1 720384..721382(-) (tpc) [Neisseria meningitidis alpha710]
ATGTCCGAAAACAAACAAAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCTTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGAGCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGGTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCGGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAGGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAG

Domains


Predicted by InterproScan.

(259-330)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.595

100

0.934


Multiple sequence alignment