Detailed information NTG0477791

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q20_RS05560
• Genome accession: NZ_CP071578
• Coordinates: 1089444..1090403 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain R72
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1084444..1095403

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q20_RS05535 (J3Q20_05535)	neuB	1084943..1085983 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q20_RS05540 (J3Q20_05540)	neuC	1085980..1087098 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q20_RS05545 (J3Q20_05545)	-	1087095..1087760 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q20_RS05550 (J3Q20_05550)	-	1087883..1088581 (+)	699	WP_236841646.1	CatB-related O-acetyltransferase	-
J3Q20_RS05555 (J3Q20_05555)	waaV	1088573..1089385 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q20_RS05560 (J3Q20_05560)	waaF	1089444..1090403 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q20_RS05565 (J3Q20_05565)	gmhA	1090384..1090944 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q20_RS05570 (J3Q20_05570)	rfaE1	1090941..1092326 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q20_RS05575 (J3Q20_05575)	rfaD	1092319..1093272 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q20_RS05580 (J3Q20_05580)	gmhB	1093273..1093833 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q20_RS05585 (J3Q20_05585)	-	1093915..1094217 (+)	303	WP_002852762.1	cytochrome c	-
J3Q20_RS05590 (J3Q20_05590)	ccoS	1094240..1094446 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477791 J3Q20_RS05560 WP_002856368.1 1089444..1090403(+) (waaF) [Campylobacter jejuni strain R72]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477791 J3Q20_RS05560 WP_002856368.1 1089444..1090403(+) (waaF) [Campylobacter jejuni strain R72]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAACTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956