Detailed information NTG0477786

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: H9Q12_RS03665
• Genome accession: NZ_CP060700
• Coordinates: 791821..792795 (-)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain Z0118SP0130
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 786821..797795

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9Q12_RS03630	gcvT	787395..788486 (-)	1092	WP_015729161.1	glycine cleavage system aminomethyltransferase GcvT	-
H9Q12_RS03635	-	788644..789171 (-)	528	WP_014613826.1	shikimate kinase	-
H9Q12_RS03640	-	789335..789820 (-)	486	WP_411354029.1	competence type IV pilus minor pilin ComGF	-
H9Q12_RS03645	-	789726..789926 (-)	201	WP_020219623.1	hypothetical protein	-
H9Q12_RS03650	comGD	790031..790471 (-)	441	WP_015729164.1	competence type IV pilus minor pilin ComGD	-
H9Q12_RS03655	comGC	790449..790772 (-)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
H9Q12_RS03660	comGB	790785..791852 (-)	1068	WP_015729166.1	competence type IV pilus assembly protein ComGB	-
H9Q12_RS03665	comGA	791821..792795 (-)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
H9Q12_RS03670	-	792955..793584 (-)	630	WP_015729230.1	MBL fold metallo-hydrolase	-
H9Q12_RS03675	-	793597..793908 (-)	312	WP_015729231.1	MTH1187 family thiamine-binding protein	-
H9Q12_RS03680	-	793909..794895 (-)	987	WP_014613817.1	ROK family glucokinase	-
H9Q12_RS03685	-	794892..795095 (-)	204	WP_014613816.1	YqgQ family protein	-
H9Q12_RS03690	-	795097..796536 (-)	1440	WP_096533269.1	rhomboid family intramembrane serine protease	-
H9Q12_RS03695	-	796555..797094 (-)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
H9Q12_RS03700	rpmG	797246..797395 (-)	150	WP_014613813.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=477786 H9Q12_RS03665 WP_014613820.1 791821..792795(-) (comGA) [Staphylococcus pseudintermedius strain Z0118SP0130]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=477786 H9Q12_RS03665 WP_014613820.1 791821..792795(-) (comGA) [Staphylococcus pseudintermedius strain Z0118SP0130]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCGTCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAATGGCATTACGCAAATTTCCGTTAATGAAAAAGCTGATATTACGTA
TGGATCATCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGCGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583