Detailed information NTG0477698

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q17_RS05750
• Genome accession: NZ_CP071576
• Coordinates: 1122456..1123415 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain R12
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1117456..1128415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q17_RS05725 (J3Q17_05725)	neuB	1117955..1118995 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q17_RS05730 (J3Q17_05730)	neuC	1118992..1120110 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q17_RS05735 (J3Q17_05735)	-	1120107..1120772 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q17_RS05740 (J3Q17_05740)	-	1120760..1121593 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
J3Q17_RS05745 (J3Q17_05745)	waaV	1121585..1122397 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q17_RS05750 (J3Q17_05750)	waaF	1122456..1123415 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q17_RS05755 (J3Q17_05755)	gmhA	1123396..1123956 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q17_RS05760 (J3Q17_05760)	rfaE1	1123953..1125347 (-)	1395	WP_032581686.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q17_RS05765 (J3Q17_05765)	rfaD	1125340..1126293 (-)	954	WP_207498263.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q17_RS05770 (J3Q17_05770)	gmhB	1126294..1126854 (-)	561	WP_207498265.1	HAD family hydrolase	-
J3Q17_RS05775 (J3Q17_05775)	-	1126936..1127238 (+)	303	WP_002852762.1	cytochrome c	-
J3Q17_RS05780 (J3Q17_05780)	ccoS	1127261..1127467 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477698 J3Q17_RS05750 WP_002856368.1 1122456..1123415(+) (waaF) [Campylobacter jejuni strain R12]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477698 J3Q17_RS05750 WP_002856368.1 1122456..1123415(+) (waaF) [Campylobacter jejuni strain R12]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956