Detailed information NTG0477650

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q16_RS05560
• Genome accession: NZ_CP071575
• Coordinates: 1089477..1090436 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain RM3147
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1084477..1095436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q16_RS05535 (J3Q16_05535)	neuB	1084976..1086016 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3Q16_RS05540 (J3Q16_05540)	neuC	1086013..1087131 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q16_RS05545 (J3Q16_05545)	-	1087128..1087793 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q16_RS05550 (J3Q16_05550)	-	1087916..1088614 (+)	699	WP_236841646.1	CatB-related O-acetyltransferase	-
J3Q16_RS05555 (J3Q16_05555)	waaV	1088606..1089418 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q16_RS05560 (J3Q16_05560)	waaF	1089477..1090436 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q16_RS05565 (J3Q16_05565)	gmhA	1090417..1090977 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q16_RS05570 (J3Q16_05570)	rfaE1	1090974..1092359 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q16_RS05575 (J3Q16_05575)	rfaD	1092352..1093305 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q16_RS05580 (J3Q16_05580)	gmhB	1093306..1093866 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q16_RS05585 (J3Q16_05585)	-	1093948..1094250 (+)	303	WP_002852762.1	cytochrome c	-
J3Q16_RS05590 (J3Q16_05590)	ccoS	1094273..1094479 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477650 J3Q16_RS05560 WP_002856368.1 1089477..1090436(+) (waaF) [Campylobacter jejuni strain RM3147]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477650 J3Q16_RS05560 WP_002856368.1 1089477..1090436(+) (waaF) [Campylobacter jejuni strain RM3147]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAACTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956