Detailed information NTG0477603

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3Q15_RS05825
• Genome accession: NZ_CP071574
• Coordinates: 1126852..1127811 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain RM1510
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1121852..1132811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3Q15_RS05800 (J3Q15_05800)	neuB	1122351..1123391 (+)	1041	WP_002852665.1	N-acetylneuraminate synthase	-
J3Q15_RS05805 (J3Q15_05805)	neuC	1123388..1124506 (+)	1119	WP_002856313.1	UDP-N-acetylglucosamine 2-epimerase	-
J3Q15_RS05810 (J3Q15_05810)	-	1124503..1125168 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3Q15_RS05815 (J3Q15_05815)	-	1125156..1125989 (+)	834	WP_207436322.1	CatB-related O-acetyltransferase	-
J3Q15_RS05820 (J3Q15_05820)	waaV	1125981..1126793 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
J3Q15_RS05825 (J3Q15_05825)	waaF	1126852..1127811 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3Q15_RS05830 (J3Q15_05830)	gmhA	1127792..1128352 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3Q15_RS05835 (J3Q15_05835)	rfaE1	1128349..1129734 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3Q15_RS05840 (J3Q15_05840)	rfaD	1129727..1130680 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3Q15_RS05845 (J3Q15_05845)	gmhB	1130681..1131241 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3Q15_RS05850 (J3Q15_05850)	-	1131323..1131625 (+)	303	WP_002852762.1	cytochrome c	-
J3Q15_RS05855 (J3Q15_05855)	ccoS	1131648..1131854 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477603 J3Q15_RS05825 WP_002856368.1 1126852..1127811(+) (waaF) [Campylobacter jejuni strain RM1510]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477603 J3Q15_RS05825 WP_002856368.1 1126852..1127811(+) (waaF) [Campylobacter jejuni strain RM1510]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956