Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7786_RS08685 Genome accession   NZ_CP060649
Coordinates   1769431..1770144 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY270     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1764431..1775144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7786_RS08675 (H7786_08725) treC 1765501..1767129 (-) 1629 WP_030126188.1 alpha,alpha-phosphotrehalase -
  H7786_RS08680 (H7786_08730) treP 1767196..1769220 (-) 2025 WP_030126187.1 PTS system trehalose-specific EIIBC component -
  H7786_RS08685 (H7786_08735) treR 1769431..1770144 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  H7786_RS08690 (H7786_08740) - 1770423..1770754 (-) 332 Protein_1670 winged helix-turn-helix transcriptional regulator -
  H7786_RS08695 (H7786_08745) - 1770941..1771797 (+) 857 Protein_1671 VOC family protein -
  H7786_RS08700 (H7786_08750) yaaA 1771839..1772570 (+) 732 WP_228646610.1 peroxide stress protein YaaA -
  H7786_RS08705 (H7786_08755) nrdG 1772744..1773358 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7786_RS08710 (H7786_08760) - 1773373..1773867 (-) 495 Protein_1674 GNAT family N-acetyltransferase -
  H7786_RS08715 (H7786_08765) - 1773876..1774811 (-) 936 WP_111718026.1 Gfo/Idh/MocA family protein -
  H7786_RS08720 (H7786_08770) - 1774840..1774986 (-) 147 WP_030126184.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=477549 H7786_RS08685 WP_002992823.1 1769431..1770144(+) (treR) [Streptococcus pyogenes strain TSPY270]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477549 H7786_RS08685 WP_002992823.1 1769431..1770144(+) (treR) [Streptococcus pyogenes strain TSPY270]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675