Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   H7788_RS08855 Genome accession   NZ_CP060647
Coordinates   56497..56592 (+) Length   31 a.a.
NCBI ID   WP_198462994.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY136     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 51497..61592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7788_RS00325 (H7788_00325) - 52370..53710 (+) 1341 WP_030127621.1 hypothetical protein -
  H7788_RS00330 (H7788_00330) purB 54078..55370 (+) 1293 WP_030127622.1 adenylosuccinate lyase -
  H7788_RS00335 (H7788_00335) rgg4 55502..56413 (+) 912 Protein_33 transcriptional regulator Rgg4/ComR -
  H7788_RS08855 comS 56497..56592 (+) 96 WP_198462994.1 quorum-sensing system DWW-type pheromone Regulator
  H7788_RS00340 (H7788_00340) ruvB 56639..57637 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  H7788_RS00345 (H7788_00345) - 57775..58212 (+) 438 WP_030127623.1 low molecular weight protein-tyrosine-phosphatase -
  H7788_RS00350 (H7788_00350) - 58235..58636 (+) 402 WP_011017240.1 MORN repeat-containing protein -
  H7788_RS00355 (H7788_00355) - 58633..60408 (+) 1776 WP_021733211.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 31 a.a.        Molecular weight: 3857.66 Da        Isoelectric Point: 10.0436

>NTDB_id=477442 H7788_RS08855 WP_198462994.1 56497..56592(+) (comS) [Streptococcus pyogenes strain TSPY136]
MLKKYKYYFIFAALLSFKVVQELSAVDWWRL

Nucleotide


Download         Length: 96 bp        

>NTDB_id=477442 H7788_RS08855 WP_198462994.1 56497..56592(+) (comS) [Streptococcus pyogenes strain TSPY136]
ATGTTAAAAAAGTATAAGTACTATTTTATATTCGCAGCTCTACTATCTTTTAAAGTAGTTCAAGAGCTTAGTGCTGTTGA
CTGGTGGCGATTATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

100

100

1
  comS Streptococcus pyogenes MGAS315

45.161

100

0.452