Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H7788_RS06915 Genome accession   NZ_CP060647
Coordinates   1373475..1374200 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain TSPY136     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1368475..1379200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7788_RS06880 (H7788_06880) rnpM 1368508..1368804 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  H7788_RS06885 (H7788_06885) nusA 1368820..1369977 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  H7788_RS06890 (H7788_06890) rimP 1370152..1370688 (-) 537 WP_030127299.1 ribosome maturation factor RimP -
  H7788_RS06900 (H7788_06900) trmB 1370948..1371583 (-) 636 WP_011184863.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7788_RS06905 (H7788_06905) ccrZ 1371583..1372374 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  H7788_RS06910 (H7788_06910) - 1372438..1373472 (-) 1035 WP_030127300.1 ABC transporter permease -
  H7788_RS06915 (H7788_06915) pptA 1373475..1374200 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  H7788_RS06920 (H7788_06920) - 1374272..1374691 (+) 420 WP_002988659.1 HIT family protein -
  H7788_RS06925 (H7788_06925) - 1374688..1375044 (+) 357 WP_002988657.1 hypothetical protein -
  H7788_RS06930 (H7788_06930) brpA 1375155..1376435 (-) 1281 WP_002988654.1 biofilm formation/cell division transcriptional regulator BrpA -
  H7788_RS06935 (H7788_06935) - 1376444..1376968 (-) 525 WP_002988650.1 GNAT family N-acetyltransferase -
  H7788_RS06940 (H7788_06940) tsaE 1376943..1377404 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H7788_RS06945 (H7788_06945) - 1377558..1379018 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=477431 H7788_RS06915 WP_002983379.1 1373475..1374200(-) (pptA) [Streptococcus pyogenes strain TSPY136]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=477431 H7788_RS06915 WP_002983379.1 1373475..1374200(-) (pptA) [Streptococcus pyogenes strain TSPY136]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714