Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7789_RS08755 Genome accession   NZ_CP060646
Coordinates   1796098..1796811 (+) Length   237 a.a.
NCBI ID   WP_032465299.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1026     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1791098..1801811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7789_RS08745 (H7789_08725) treC 1792168..1793796 (-) 1629 WP_032465297.1 alpha,alpha-phosphotrehalase -
  H7789_RS08750 (H7789_08730) treP 1793863..1795887 (-) 2025 WP_032465298.1 PTS system trehalose-specific EIIBC component -
  H7789_RS08755 (H7789_08735) treR 1796098..1796811 (+) 714 WP_032465299.1 trehalose operon repressor Regulator
  H7789_RS08760 (H7789_08740) - 1797090..1797429 (-) 340 Protein_1676 winged helix-turn-helix transcriptional regulator -
  H7789_RS08765 (H7789_08745) - 1797615..1798472 (+) 858 WP_228628179.1 VOC family protein -
  H7789_RS08770 (H7789_08750) yaaA 1798514..1799245 (+) 732 WP_109821232.1 peroxide stress protein YaaA -
  H7789_RS08775 (H7789_08755) nrdG 1799419..1800033 (-) 615 WP_136018191.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7789_RS08780 (H7789_08760) - 1800048..1800542 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  H7789_RS08785 (H7789_08765) - 1800551..1801486 (-) 936 WP_228628181.1 Gfo/Idh/MocA family protein -
  H7789_RS08790 (H7789_08770) - 1801515..1801661 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27622.77 Da        Isoelectric Point: 9.6390

>NTDB_id=477384 H7789_RS08755 WP_032465299.1 1796098..1796811(+) (treR) [Streptococcus pyogenes strain TSPY1026]
MTRYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRAK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477384 H7789_RS08755 WP_032465299.1 1796098..1796811(+) (treR) [Streptococcus pyogenes strain TSPY1026]
ATGACAAGGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTAG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGAGCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671