Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7790_RS08935 Genome accession   NZ_CP060645
Coordinates   1819627..1820340 (+) Length   237 a.a.
NCBI ID   WP_136073828.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1349     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1814627..1825340
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7790_RS08925 (H7790_08935) treC 1815697..1817325 (-) 1629 WP_115230763.1 alpha,alpha-phosphotrehalase -
  H7790_RS08930 (H7790_08940) treP 1817392..1819416 (-) 2025 WP_115230764.1 PTS system trehalose-specific EIIBC component -
  H7790_RS08935 (H7790_08945) treR 1819627..1820340 (+) 714 WP_136073828.1 trehalose operon repressor Regulator
  H7790_RS08940 (H7790_08950) - 1820619..1820950 (-) 332 Protein_1731 winged helix-turn-helix transcriptional regulator -
  H7790_RS08945 (H7790_08955) - 1821137..1821994 (+) 858 WP_032459979.1 VOC family protein -
  H7790_RS08950 (H7790_08960) yaaA 1822036..1822767 (+) 732 WP_032459980.1 peroxide stress protein YaaA -
  H7790_RS08955 (H7790_08965) nrdG 1822941..1823555 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7790_RS08960 (H7790_08970) - 1823555..1824064 (-) 510 WP_115230765.1 GNAT family N-acetyltransferase -
  H7790_RS08965 (H7790_08975) - 1824073..1825008 (-) 936 WP_076634441.1 Gfo/Idh/MocA family protein -
  H7790_RS08970 (H7790_08980) - 1825041..1825184 (-) 144 WP_168391518.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27663.82 Da        Isoelectric Point: 9.7513

>NTDB_id=477331 H7790_RS08935 WP_136073828.1 1819627..1820340(+) (treR) [Streptococcus pyogenes strain TSPY1349]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKRIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477331 H7790_RS08935 WP_136073828.1 1819627..1820340(+) (treR) [Streptococcus pyogenes strain TSPY1349]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACGGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671