Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H7790_RS06355 Genome accession   NZ_CP060645
Coordinates   1266985..1268022 (-) Length   345 a.a.
NCBI ID   WP_115230462.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1349     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1261985..1273022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7790_RS06330 (H7790_06350) - 1261989..1262516 (-) 528 WP_002983837.1 Dps family protein -
  H7790_RS06335 (H7790_06355) - 1262744..1263370 (+) 627 WP_002989076.1 prepilin peptidase -
  H7790_RS06340 (H7790_06360) rlmN 1263452..1264531 (-) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  H7790_RS06345 (H7790_06365) - 1264535..1265155 (-) 621 WP_002992791.1 YutD family protein -
  H7790_RS06350 (H7790_06370) - 1265603..1266580 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  H7790_RS06355 (H7790_06375) sepM 1266985..1268022 (-) 1038 WP_115230462.1 SepM family pheromone-processing serine protease Regulator
  H7790_RS06360 (H7790_06380) coaD 1268009..1268500 (-) 492 WP_115230461.1 pantetheine-phosphate adenylyltransferase -
  H7790_RS06365 (H7790_06385) rsmD 1268490..1269029 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H7790_RS06370 (H7790_06390) asnA 1269156..1270148 (-) 993 WP_023611792.1 aspartate--ammonia ligase -
  H7790_RS06375 (H7790_06395) arcC 1270461..1271411 (-) 951 WP_010922501.1 carbamate kinase -
  H7790_RS06380 (H7790_06400) - 1271431..1272762 (-) 1332 WP_136073820.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37571.33 Da        Isoelectric Point: 9.6692

>NTDB_id=477320 H7790_RS06355 WP_115230462.1 1266985..1268022(-) (sepM) [Streptococcus pyogenes strain TSPY1349]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRTVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVMVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=477320 H7790_RS06355 WP_115230462.1 1266985..1268022(-) (sepM) [Streptococcus pyogenes strain TSPY1349]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGACTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCGCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTATGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.275

100

0.693