Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7790_RS02665 Genome accession   NZ_CP060645
Coordinates   502975..503784 (+) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1349     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 497975..508784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7790_RS02645 (H7790_02675) - 498417..499664 (+) 1248 WP_014407393.1 AMP-binding protein -
  H7790_RS02650 (H7790_02680) - 499720..500754 (+) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  H7790_RS02655 (H7790_02685) vicR 500916..501626 (+) 711 WP_002985645.1 response regulator YycF Regulator
  H7790_RS02660 (H7790_02690) vicK 501619..502971 (+) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7790_RS02665 (H7790_02695) vicX 502975..503784 (+) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  H7790_RS02670 (H7790_02700) rnc 504216..504908 (+) 693 WP_002990670.1 ribonuclease III -
  H7790_RS02675 (H7790_02705) smc 504909..508448 (+) 3540 WP_115230631.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=477308 H7790_RS02665 WP_023612763.1 502975..503784(+) (vicX) [Streptococcus pyogenes strain TSPY1349]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=477308 H7790_RS02665 WP_023612763.1 502975..503784(+) (vicX) [Streptococcus pyogenes strain TSPY1349]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGCTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGTAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762