Detailed information NTG0477277

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J1G53_RS04975
• Genome accession: NZ_CP071490
• Coordinates: 1052064..1054892 (-)
• Length: 942 a.a.
• NCBI ID: WP_075592630.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain GHP1808
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1047064..1059892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1G53_RS04965 (J1G53_04965)	-	1051382..1051633 (-)	252	WP_202113892.1	hypothetical protein	-
J1G53_RS04970 (J1G53_04970)	-	1051599..1051979 (-)	381	WP_010786782.1	YacL family protein	-
J1G53_RS04975 (J1G53_04975)	uvrA	1052064..1054892 (-)	2829	WP_075592630.1	excinuclease ABC subunit UvrA	Machinery gene
J1G53_RS04980 (J1G53_04980)	ssb	1055058..1055576 (+)	519	WP_075605585.1	single-stranded DNA-binding protein	Machinery gene
J1G53_RS04985 (J1G53_04985)	-	1055782..1056996 (+)	1215	WP_112062944.1	ATP-binding protein	-
J1G53_RS04990 (J1G53_04990)	-	1057068..1057319 (-)	252	Protein_964	helicase HerA-like domain-containing protein	-
J1G53_RS04995 (J1G53_04995)	rhlB	1057386..1058606 (-)	1221	WP_207342590.1	ATP-dependent RNA helicase RhlB	-
J1G53_RS05000 (J1G53_05000)	-	1058670..1058942 (-)	273	WP_005712616.1	HigA family addiction module antitoxin	-
J1G53_RS05005 (J1G53_05005)	-	1058953..1059231 (-)	279	WP_012621703.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104602.19 Da
• Isoelectric Point: 6.6726

>NTDB_id=477277 J1G53_RS04975 WP_075592630.1 1052064..1054892(-) (uvrA) [Glaesserella parasuis strain GHP1808]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAESFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDVSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELVKYI
NNRVCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMVADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPVGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLNEILKKK

Nucleotide

• Length: 2829 bp

>NTDB_id=477277 J1G53_RS04975 WP_075592630.1 1052064..1054892(-) (uvrA) [Glaesserella parasuis strain GHP1808]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAATTTAT
TGTGATTACAGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACTCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGTCAGTTCTTATCTTTGATGGAAAAGCCTGATGTCGATCACATTGAAGGGCTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCGCACAATCCTCGTTCTACGGTAGGGACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACAATTTCGC
AAATGGTGGATAGAGTGCTGGAAGAACCTGAAGGTAAGCGTTTGATGTTGCTTTCTCCTGTGGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGTTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCCAAATTAGAGTTGCAGAAAAAACATACGATTGAAGTGGTAATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCGGAGTCCTTTGAAACGGCATTGGAACTTTCTGGCTCAACGGCGATTATTGCCGATATGGACGATCCA
AATGCGGAAGAGTTAGTGTTTTCGTCGAGTTTTGCTTGCTCTCACTGTGGCTATTCGCTGACGGAACTAGAACCACGCCT
TTTCTCGTTTAATAATCCGGCCGGAGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAACCCTGATGTGTCTTTAGCAAGCGGTGCGATTAAGGGTTGGGATCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCAGTGGCTAAGCATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAACATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGGTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGTTAAATATATT
AATAATCGTGTTTGTACCGATTGTGAAGGCTCTCGTTTACGCCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTATCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGCGGTGAAGCCCAACGTATTCGCCTTGCCAGCCAAATCGGTGCTGGGTTAATGGGGGT
GATGTATGTGCTTGATGAACCGTCTATTGGCTTGCACCAGCGAGATAACGAACGTTTATTGAACACTCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGTGGCAGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGCGGTCAGATTATTGCTCAAGGCACAGCTCAAGAAATTATGCAAAATGAAGCATCGATTAC
GGGTAAATTCTTATCTGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGAGCAAGCGGTAATAACTTAAAAGAAGTCGATTTAGCTATTCCTGTTGGCTTGTTTACTTGTATTACAGGGGTA
TCGGGGTCGGGCAAATCCACCTTAATTAACGACACCTTATTCCCGATTGCTCAAAATGCGTTAAATCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGATGGCTTGGCACATTTCGATAAAGTAATCGACATCAATCAAAGTCCGATTGGAC
GTACTCCACGTTCAAACCCTGCGACTTACACAGGTTTATTTACCCCGATCCGTGAACTCTTTGCAGGCACTCAGGAAGCA
AGAGCAAGGGGCTATACGGTCGGACGTTTCAGCTTTAACGTACGTGGCGGACGTTGTGAAGCCTGTCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTGTATGTGCCTTGCGATCACTGTAAAGGCAAACGCTACAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAGGTGTTAGATATGACCGTGGAAGAAGCGCGTGAGTTTTTTGAT
GCCGTGCCGATGATTGCTCGTAAGTTACAGACTTTGATGGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTATCAGGTGGTGAAGCTCAACGGGTGAAACTGGCGGCGGAATTATCTAAACGTGATACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACGGGATTGCACTTCGCCGACATTAAACAATTATTGACCGTATTACACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACCGCAGACTGGATTGTCGATTTAGGCCCAGAAGG
CGGTAGCGGCGGCGGACAGATTATCGCTGAAGGTACACCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCACGTT
TTTTAAACGAAATCTTAAAAAAGAAATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-396)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.93	99.575	0.567
uvrA	Streptococcus pneumoniae TIGR4	56.93	99.575	0.567
uvrA	Streptococcus pneumoniae D39	56.93	99.575	0.567