Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7791_RS08235 Genome accession   NZ_CP060644
Coordinates   1698778..1699491 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain TSPY1309     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1693778..1704491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7791_RS08225 (H7791_08210) treC 1694848..1696476 (-) 1629 WP_115219865.1 alpha,alpha-phosphotrehalase -
  H7791_RS08230 (H7791_08215) treP 1696543..1698567 (-) 2025 WP_228634971.1 PTS system trehalose-specific EIIBC component -
  H7791_RS08235 (H7791_08220) treR 1698778..1699491 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  H7791_RS08240 (H7791_08225) - 1699770..1700108 (-) 339 Protein_1574 winged helix-turn-helix transcriptional regulator -
  H7791_RS08245 (H7791_08230) - 1700294..1701151 (+) 858 WP_111711508.1 VOC family protein -
  H7791_RS08250 (H7791_08235) yaaA 1701193..1701924 (+) 732 WP_111718025.1 peroxide stress protein YaaA -
  H7791_RS08255 (H7791_08240) nrdG 1702098..1702712 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7791_RS08260 (H7791_08245) - 1702727..1703221 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  H7791_RS08265 (H7791_08250) - 1703230..1704165 (-) 936 WP_136268349.1 Gfo/Idh/MocA family protein -
  H7791_RS08270 (H7791_08255) - 1704194..1704340 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=477276 H7791_RS08235 WP_002982243.1 1698778..1699491(+) (treR) [Streptococcus pyogenes strain TSPY1309]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477276 H7791_RS08235 WP_002982243.1 1698778..1699491(+) (treR) [Streptococcus pyogenes strain TSPY1309]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACTAAGGCAG
GCCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGCTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGACGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679