Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7792_RS08210 Genome accession   NZ_CP060643
Coordinates   1693754..1694467 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY416     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1688754..1699467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7792_RS08200 (H7792_08170) treC 1689824..1691452 (-) 1629 WP_111713998.1 alpha,alpha-phosphotrehalase -
  H7792_RS08205 (H7792_08175) treP 1691519..1693543 (-) 2025 WP_136292673.1 PTS system trehalose-specific EIIBC component -
  H7792_RS08210 (H7792_08180) treR 1693754..1694467 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  H7792_RS08215 (H7792_08185) - 1694746..1695084 (-) 339 Protein_1570 winged helix-turn-helix transcriptional regulator -
  H7792_RS08220 (H7792_08190) - 1695270..1696127 (+) 858 WP_228650341.1 VOC family protein -
  H7792_RS08225 (H7792_08195) yaaA 1696169..1696900 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  H7792_RS08230 (H7792_08200) nrdG 1697074..1697688 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7792_RS08235 (H7792_08205) - 1697688..1698197 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  H7792_RS08240 (H7792_08210) - 1698206..1699141 (-) 936 WP_228650342.1 Gfo/Idh/MocA family protein -
  H7792_RS08245 (H7792_08215) - 1699170..1699316 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=477222 H7792_RS08210 WP_002992823.1 1693754..1694467(+) (treR) [Streptococcus pyogenes strain TSPY416]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477222 H7792_RS08210 WP_002992823.1 1693754..1694467(+) (treR) [Streptococcus pyogenes strain TSPY416]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675