Detailed information NTG0477219

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J1G50_RS05380
• Genome accession: NZ_CP071489
• Coordinates: 1063247..1066075 (-)
• Length: 942 a.a.
• NCBI ID: WP_038513981.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain YHP1815
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1058247..1071075

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1G50_RS05370 (J1G50_05370)	-	1059494..1062706 (+)	3213	WP_207356855.1	ESPR-type extended signal peptide-containing protein	-
J1G50_RS05375 (J1G50_05375)	-	1062783..1063163 (-)	381	WP_021114866.1	YacL family protein	-
J1G50_RS05380 (J1G50_05380)	uvrA	1063247..1066075 (-)	2829	WP_038513981.1	excinuclease ABC subunit UvrA	Machinery gene
J1G50_RS05385 (J1G50_05385)	ssb	1066378..1066920 (+)	543	WP_021115958.1	single-stranded DNA-binding protein	Machinery gene
J1G50_RS05390 (J1G50_05390)	-	1067074..1068561 (-)	1488	WP_207356856.1	helicase HerA-like C-terminal domain-containing protein	-
J1G50_RS05395 (J1G50_05395)	rhlB	1068571..1069791 (-)	1221	WP_160405614.1	ATP-dependent RNA helicase RhlB	-
J1G50_RS05400 (J1G50_05400)	-	1069855..1070127 (-)	273	WP_005712616.1	HigA family addiction module antitoxin	-
J1G50_RS05405 (J1G50_05405)	-	1070138..1070416 (-)	279	WP_005712614.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104499.01 Da
• Isoelectric Point: 6.6453

>NTDB_id=477219 J1G50_RS05380 WP_038513981.1 1063247..1066075(-) (uvrA) [Glaesserella parasuis strain YHP1815]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAESFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDMSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELAKYI
NNRTCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMAADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPVGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAYFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLKEILKKG

Nucleotide

• Length: 2829 bp

>NTDB_id=477219 J1G50_RS05380 WP_038513981.1 1063247..1066075(-) (uvrA) [Glaesserella parasuis strain YHP1815]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAGTTTAT
TGTGATTACGGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACCCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGCCAGTTCTTGTCTTTGATGGAAAAGCCTGATGTCGATCATATTGAAGGACTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCGCACAATCCTCGTTCTACGGTGGGAACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTATTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACGATTTCGC
AAATGGTGGATAGAGTGCTGGAAGAGCCTGAAGGTAAGCGTTTGATGTTGCTTTCCCCTGTGGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGCTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCAAAACTTGAATTGCAGAAAAAACATACGATTGAAGTGGTAATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCCGAGTCCTTTGAAACGGCATTGGAACTCTCAGGTTCAACAGCGATTATTGCCGATATGGACGATCCA
AATGCAGAAGAGTTAGTGTTTTCGTCGAGTTTTGCTTGCTCTCACTGTGGCTATTCGCTGACGGAATTAGAGCCACGTCT
TTTCTCGTTTAATAATCCTGCTGGGGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAATCCTGATATGTCCTTAGCAAGCGGTGCGATTAAGGGTTGGGATCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCAGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAATATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGGTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTACTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAAAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTGTCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCACTCTCT
CGTTCGGCAGAAACCTTATCAGGTGGTGAAGCTCAACGTATTCGCCTTGCCAGCCAAATCGGTGCAGGGTTAGTGGGAGT
GATGTACGTGCTTGATGAACCGTCTATTGGCTTGCACCAACGAGATAATGAACGTTTACTAAACACGCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGCGGCGGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGTGGGCAGATTATTGCTCAAGGTACGGCTCAAGAAATTATGCAAAATGAAGCATCAATTAC
GGGCAAATTCTTATCGGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGGGCGAGCGGTAATAACTTGAAAGAAGTCGATTTAGCCATTCCTGTCGGTCTGTTTACTTGTATTACAGGGGTA
TCGGGTTCGGGCAAATCCACCTTAATTAACGATACCTTATTCCCGATTGCTCAAAATGCGTTAAACCGTGCAGAAAACAG
CGATGTCGCTCCTTATAAGAGCATTGACGGATTGGCTTATTTCGACAAAGTGATCGACATCAATCAAAGCCCGATTGGAC
GTACGCCACGTTCAAACCCTGCGACTTATACAGGTTTATTTACCCCGATTCGTGAACTCTTTGCTGGTACACAAGAAGCA
AGAGCAAGGGGTTACACTGTCGGACGTTTCAGCTTTAACGTGCGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAAGTGTTAGATATGACTGTGGAAGAAGCTCGTGAGTTTTTTGAT
GCCGTGCCGATGATTGCACGTAAGCTACAAACTTTAATAGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTGTCAGGTGGCGAAGCTCAGCGGGTGAAACTGGCAGCGGAATTATCCAAACGTGACACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACAGGATTACACTTCGCCGACATTAAACAATTATTGACCGTATTGCACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACGGCAGACTGGATTGTCGATCTAGGTCCTGAAGG
CGGTAGCGGTGGCGGACAGATTATCGCCGAAGGTACGCCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCAAGAT
TTTTAAAAGAGATTTTGAAGAAAGGTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.976	99.682	0.568
uvrA	Streptococcus pneumoniae TIGR4	56.976	99.682	0.568
uvrA	Streptococcus pneumoniae D39	56.976	99.682	0.568