Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   H7792_RS07420 Genome accession   NZ_CP060643
Coordinates   1509618..1510169 (-) Length   183 a.a.
NCBI ID   WP_080011078.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY416     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1504618..1515169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7792_RS07385 (H7792_07365) - 1504622..1505365 (-) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -
  H7792_RS07390 (H7792_07370) rsfS 1505413..1505766 (-) 354 WP_015055915.1 ribosome silencing factor -
  H7792_RS07395 (H7792_07375) yqeK 1505790..1506383 (-) 594 WP_111705214.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  H7792_RS07400 (H7792_07380) - 1506380..1507012 (-) 633 WP_111713935.1 nicotinate-nucleotide adenylyltransferase -
  H7792_RS07405 (H7792_07385) yhbY 1507081..1507389 (-) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  H7792_RS07410 (H7792_07390) yqeH 1507414..1508532 (-) 1119 WP_136019962.1 ribosome biogenesis GTPase YqeH -
  H7792_RS07415 (H7792_07395) - 1508532..1509059 (-) 528 WP_194088509.1 YqeG family HAD IIIA-type phosphatase -
  H7792_RS07420 (H7792_07400) comX/sigX/comX2/sigX2 1509618..1510169 (-) 552 WP_080011078.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22228.03 Da        Isoelectric Point: 9.8369

>NTDB_id=477219 H7792_RS07420 WP_080011078.1 1509618..1510169(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY416]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
CFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=477219 H7792_RS07420 WP_080011078.1 1509618..1510169(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain TSPY416]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
TGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.