Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7793_RS08690 Genome accession   NZ_CP060642
Coordinates   1762506..1763219 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1312     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1757506..1768219
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7793_RS08680 (H7793_08680) treC 1758576..1760204 (-) 1629 WP_136021523.1 alpha,alpha-phosphotrehalase -
  H7793_RS08685 (H7793_08685) treP 1760271..1762295 (-) 2025 WP_136021522.1 PTS system trehalose-specific EIIBC component -
  H7793_RS08690 (H7793_08690) treR 1762506..1763219 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  H7793_RS08695 (H7793_08695) - 1763499..1763837 (-) 339 Protein_1669 winged helix-turn-helix transcriptional regulator -
  H7793_RS08700 (H7793_08700) - 1764023..1764880 (+) 858 WP_023605347.1 VOC family protein -
  H7793_RS08705 (H7793_08705) yaaA 1764922..1765653 (+) 732 WP_002982222.1 peroxide stress protein YaaA -
  H7793_RS08710 (H7793_08710) nrdG 1765827..1766441 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7793_RS08715 (H7793_08715) - 1766441..1766950 (-) 510 WP_032464619.1 GNAT family N-acetyltransferase -
  H7793_RS08720 (H7793_08720) - 1766959..1767894 (-) 936 WP_136021521.1 Gfo/Idh/MocA family protein -
  H7793_RS08725 (H7793_08725) - 1767923..1768069 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=477168 H7793_RS08690 WP_002992823.1 1762506..1763219(+) (treR) [Streptococcus pyogenes strain TSPY1312]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477168 H7793_RS08690 WP_002992823.1 1762506..1763219(+) (treR) [Streptococcus pyogenes strain TSPY1312]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675