Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7795_RS08585 Genome accession   NZ_CP060641
Coordinates   1743912..1744625 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain TSPY210     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1738912..1749625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7795_RS08575 (H7795_08545) treC 1739982..1741610 (-) 1629 WP_023613017.1 alpha,alpha-phosphotrehalase -
  H7795_RS08580 (H7795_08550) treP 1741677..1743701 (-) 2025 WP_023613012.1 PTS system trehalose-specific EIIBC component -
  H7795_RS08585 (H7795_08555) treR 1743912..1744625 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  H7795_RS08590 (H7795_08560) - 1744871..1745241 (-) 371 Protein_1640 winged helix-turn-helix transcriptional regulator -
  H7795_RS08595 (H7795_08565) - 1745428..1746285 (+) 858 WP_023613004.1 VOC family protein -
  H7795_RS08600 (H7795_08570) yaaA 1746327..1747058 (+) 732 WP_023612988.1 peroxide stress protein YaaA -
  H7795_RS08605 (H7795_08575) nrdG 1747232..1747846 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7795_RS08610 (H7795_08580) - 1747846..1748355 (-) 510 WP_011285262.1 GNAT family N-acetyltransferase -
  H7795_RS08615 (H7795_08585) - 1748364..1749299 (-) 936 WP_023612999.1 Gfo/Idh/MocA family protein -
  H7795_RS08620 (H7795_08590) - 1749328..1749474 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=477115 H7795_RS08585 WP_002982243.1 1743912..1744625(+) (treR) [Streptococcus pyogenes strain TSPY210]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=477115 H7795_RS08585 WP_002982243.1 1743912..1744625(+) (treR) [Streptococcus pyogenes strain TSPY210]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679