Detailed information NTG0477114

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: DDR89_RS05595
• Genome accession: NZ_CP071460
• Coordinates: 1083329..1084288 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain CAMSA2002
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078329..1089288

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDR89_RS05570 (DDR89_05570)	neuC	1078893..1080008 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
DDR89_RS09130 (DDR89_05575)	-	1080005..1080919 (+)	915	Protein_1092	beta-1,4-N-acetylgalactosaminyltransferase	-
DDR89_RS09135 (DDR89_05580)	-	1080953..1081615 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
DDR89_RS05585 (DDR89_05585)	-	1081610..1082462 (-)	853	Protein_1094	glycosyltransferase	-
DDR89_RS05590 (DDR89_05590)	waaV	1082446..1083270 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
DDR89_RS05595 (DDR89_05595)	waaF	1083329..1084288 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
DDR89_RS05600 (DDR89_05600)	gmhA	1084269..1084829 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
DDR89_RS05605 (DDR89_05605)	rfaE1	1084826..1086211 (-)	1386	WP_052778309.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
DDR89_RS05610 (DDR89_05610)	rfaD	1086204..1087157 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
DDR89_RS05615 (DDR89_05615)	gmhB	1087158..1087718 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
DDR89_RS05620 (DDR89_05620)	-	1087800..1088102 (+)	303	WP_002852762.1	cytochrome c	-
DDR89_RS05625 (DDR89_05625)	ccoS	1088125..1088331 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=477114 DDR89_RS05595 WP_002875425.1 1083329..1084288(+) (waaF) [Campylobacter jejuni strain CAMSA2002]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477114 DDR89_RS05595 WP_002875425.1 1083329..1084288(+) (waaF) [Campylobacter jejuni strain CAMSA2002]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1