Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   H7795_RS00335 Genome accession   NZ_CP060641
Coordinates   54033..54131 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY210     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49033..59131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7795_RS09140 (H7795_00320) - 49908..51237 (+) 1330 Protein_30 hypothetical protein -
  H7795_RS00325 (H7795_00325) purB 51606..52898 (+) 1293 WP_023612869.1 adenylosuccinate lyase -
  H7795_RS00330 (H7795_00330) comR 53031..53942 (+) 912 WP_014635220.1 helix-turn-helix domain-containing protein Regulator
  H7795_RS00335 comS 54033..54131 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  H7795_RS00340 (H7795_00335) ruvB 54162..55160 (+) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  H7795_RS00345 (H7795_00340) - 55298..55735 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  H7795_RS00350 (H7795_00345) - 55758..56159 (+) 402 WP_011017240.1 MORN repeat-containing protein -
  H7795_RS00355 (H7795_00350) - 56156..57931 (+) 1776 WP_002986669.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=477068 H7795_RS00335 WP_020833188.1 54033..54131(+) (comS) [Streptococcus pyogenes strain TSPY210]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=477068 H7795_RS00335 WP_020833188.1 54033..54131(+) (comS) [Streptococcus pyogenes strain TSPY210]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437