Detailed information NTG0477068

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: DDV75_RS05605
• Genome accession: NZ_CP071459
• Coordinates: 1080398..1081357 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni strain CAMSA2038
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1075398..1086357

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDV75_RS05580 (DDV75_05580)	neuC	1075964..1077079 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
DDV75_RS08885 (DDV75_05585)	-	1077076..1077990 (+)	915	Protein_1091	beta-1,4-N-acetylgalactosaminyltransferase	-
DDV75_RS08890 (DDV75_05590)	-	1078024..1078686 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
DDV75_RS05595 (DDV75_05595)	-	1078681..1079531 (-)	851	Protein_1093	glycosyltransferase	-
DDV75_RS05600 (DDV75_05600)	waaV	1079515..1080339 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
DDV75_RS05605 (DDV75_05605)	waaF	1080398..1081357 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
DDV75_RS05610 (DDV75_05610)	gmhA	1081338..1081898 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
DDV75_RS05615 (DDV75_05615)	rfaE1	1081895..1083280 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
DDV75_RS05620 (DDV75_05620)	rfaD	1083273..1084226 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
DDV75_RS05625 (DDV75_05625)	gmhB	1084227..1084787 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
DDV75_RS05630 (DDV75_05630)	-	1084869..1085171 (+)	303	WP_002852762.1	cytochrome c	-
DDV75_RS05635 (DDV75_05635)	ccoS	1085194..1085400 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=477068 DDV75_RS05605 WP_002875425.1 1080398..1081357(+) (waaF) [Campylobacter jejuni strain CAMSA2038]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477068 DDV75_RS05605 WP_002875425.1 1080398..1081357(+) (waaF) [Campylobacter jejuni strain CAMSA2038]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1