Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   H7796_RS06425 Genome accession   NZ_CP060640
Coordinates   1317754..1318479 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain TSPY764     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1312754..1323479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7796_RS06390 (H7796_06405) rnpM 1312788..1313084 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  H7796_RS06395 (H7796_06410) nusA 1313100..1314257 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  H7796_RS06400 (H7796_06415) rimP 1314432..1314968 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  H7796_RS06410 (H7796_06425) trmB 1315227..1315862 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  H7796_RS06415 (H7796_06430) ccrZ 1315862..1316653 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  H7796_RS06420 (H7796_06435) - 1316717..1317751 (-) 1035 WP_228631287.1 ABC transporter permease -
  H7796_RS06425 (H7796_06440) pptA 1317754..1318479 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  H7796_RS06430 (H7796_06445) - 1318551..1318970 (+) 420 WP_002983376.1 HIT family protein -
  H7796_RS06435 (H7796_06450) - 1318967..1319323 (+) 357 WP_020905404.1 hypothetical protein -
  H7796_RS06440 (H7796_06455) brpA 1319434..1320708 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  H7796_RS06445 (H7796_06460) - 1320717..1321241 (-) 525 WP_020905405.1 GNAT family N-acetyltransferase -
  H7796_RS06450 (H7796_06465) tsaE 1321216..1321677 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  H7796_RS06455 (H7796_06470) - 1321831..1323291 (-) 1461 WP_012560892.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=477055 H7796_RS06425 WP_002983379.1 1317754..1318479(-) (pptA) [Streptococcus pyogenes strain TSPY764]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=477055 H7796_RS06425 WP_002983379.1 1317754..1318479(-) (pptA) [Streptococcus pyogenes strain TSPY764]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714