Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   H7796_RS05630 Genome accession   NZ_CP060640
Coordinates   1150753..1151790 (-) Length   345 a.a.
NCBI ID   WP_111693301.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY764     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1145753..1156790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7796_RS05605 (H7796_05620) - 1145757..1146284 (-) 528 WP_002983837.1 Dps family protein -
  H7796_RS05610 (H7796_05625) - 1146512..1147138 (+) 627 WP_136274263.1 prepilin peptidase -
  H7796_RS05615 (H7796_05630) rlmN 1147220..1148299 (-) 1080 WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  H7796_RS05620 (H7796_05635) - 1148303..1148923 (-) 621 WP_002992791.1 YutD family protein -
  H7796_RS05625 (H7796_05640) - 1149371..1150348 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  H7796_RS05630 (H7796_05645) sepM 1150753..1151790 (-) 1038 WP_111693301.1 SepM family pheromone-processing serine protease Regulator
  H7796_RS05635 (H7796_05650) coaD 1151777..1152268 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  H7796_RS05640 (H7796_05655) rsmD 1152258..1152797 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  H7796_RS05645 (H7796_05660) asnA 1152920..1153912 (-) 993 WP_136274266.1 aspartate--ammonia ligase -
  H7796_RS05650 (H7796_05665) arcC 1154225..1155175 (-) 951 WP_009880962.1 carbamate kinase -
  H7796_RS05655 (H7796_05670) - 1155195..1156526 (-) 1332 WP_136274268.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37527.22 Da        Isoelectric Point: 9.6692

>NTDB_id=477050 H7796_RS05630 WP_111693301.1 1150753..1151790(-) (sepM) [Streptococcus pyogenes strain TSPY764]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRSVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=477050 H7796_RS05630 WP_111693301.1 1150753..1151790(-) (sepM) [Streptococcus pyogenes strain TSPY764]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGTCTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGAGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGGGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.565

100

0.696