Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7798_RS08790 Genome accession   NZ_CP060638
Coordinates   1795226..1795939 (+) Length   237 a.a.
NCBI ID   WP_111718024.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY141     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1790226..1800939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7798_RS08780 (H7798_08810) treC 1791295..1792923 (-) 1629 WP_111718022.1 alpha,alpha-phosphotrehalase -
  H7798_RS08785 (H7798_08815) treP 1792991..1795015 (-) 2025 WP_111718023.1 PTS system trehalose-specific EIIBC component -
  H7798_RS08790 (H7798_08820) treR 1795226..1795939 (+) 714 WP_111718024.1 trehalose operon repressor Regulator
  H7798_RS08795 (H7798_08825) - 1796218..1796556 (-) 339 Protein_1704 winged helix-turn-helix transcriptional regulator -
  H7798_RS08800 (H7798_08830) - 1796742..1797599 (+) 858 WP_111711508.1 VOC family protein -
  H7798_RS08805 (H7798_08835) yaaA 1797641..1798372 (+) 732 WP_111718025.1 peroxide stress protein YaaA -
  H7798_RS08810 (H7798_08840) nrdG 1798546..1799160 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7798_RS08815 (H7798_08845) - 1799175..1799669 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  H7798_RS08820 (H7798_08850) - 1799678..1800613 (-) 936 WP_111718026.1 Gfo/Idh/MocA family protein -
  H7798_RS08825 (H7798_08855) - 1800642..1800788 (-) 147 WP_030126184.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27573.73 Da        Isoelectric Point: 9.4759

>NTDB_id=476954 H7798_RS08790 WP_111718024.1 1795226..1795939(+) (treR) [Streptococcus pyogenes strain TSPY141]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESHHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=476954 H7798_RS08790 WP_111718024.1 1795226..1795939(+) (treR) [Streptococcus pyogenes strain TSPY141]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCACCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675