Detailed information NTG0476878

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: H9Q79_RS01145
• Genome accession: NZ_CP060635
• Coordinates: 247594..248976 (+)
• Length: 460 a.a.
• NCBI ID: WP_118648651.1
• Uniprot ID: A0A7G9GDR2
• Organism: Wansuia hejianensis strain NSJ-29
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 242594..253976

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9Q79_RS01125 (H9Q79_01130)	-	242614..243003 (+)	390	WP_118648647.1	GntR family transcriptional regulator	-
H9Q79_RS01130 (H9Q79_01135)	-	243074..245521 (+)	2448	WP_249329038.1	ATP-dependent Clp protease ATP-binding subunit	-
H9Q79_RS01135 (H9Q79_01140)	-	245548..246873 (+)	1326	WP_249329039.1	MATE family efflux transporter	-
H9Q79_RS01140 (H9Q79_01145)	-	247077..247493 (+)	417	WP_118648649.1	endosialidase	-
H9Q79_RS01145 (H9Q79_01150)	radA	247594..248976 (+)	1383	WP_118648651.1	DNA repair protein RadA	Machinery gene

Sequence

Protein

• Length: 460 a.a.
• Molecular weight: 49867.55 Da
• Isoelectric Point: 7.7667

>NTDB_id=476878 H9Q79_RS01145 WP_118648651.1 247594..248976(+) (radA) [Wansuia hejianensis strain NSJ-29]
MAKEKKTVYFCQNCGYESGKWMGQCPGCRQWNTFVEEVVSIKQGAQSGSRVRGAAAPVSLREISLDENSRMKTGIGELDR
VLGGGIVPGSLTLVGGDPGIGKSTLLLQVCKQLSDAGRSVLYVSGEESLQQIKMRAVRIGTFQDGLKLLCETNLETIRTC
IEKEPPQAVVIDSIQTMYNEQVSSSPGSVSQVRESTGVLLQIAKGLQVPVFIVGHVTKDGSVAGPRVLEHMVDTVLYFEG
DRHASYRILRAVKNRFGSTNEIGVFEMRQEGLMEVKNPSEFMLDGKPEGASGSVVACSLEGSRPIMIEIQALVCHSNFGI
PRRTANGTDFNRVNLLMAVLEKRARMNLSSSDAYVNIAGGIKMTEPAVDLGILLAIASSQKDLVISEKTVVFGEVGLSGE
VRSVSMADQRVQEAEKLGFETVILPKVCMKSLLSKNNKGIHLVPVENIKDAIRFIEKGQV

Nucleotide

• Length: 1383 bp

>NTDB_id=476878 H9Q79_RS01145 WP_118648651.1 247594..248976(+) (radA) [Wansuia hejianensis strain NSJ-29]
ATGGCGAAAGAGAAAAAAACCGTATATTTCTGCCAGAACTGTGGTTATGAATCAGGAAAGTGGATGGGCCAGTGTCCGGG
ATGCCGGCAGTGGAATACGTTTGTGGAAGAAGTGGTTTCCATAAAGCAGGGCGCACAGAGCGGCAGCCGTGTGAGAGGGG
CTGCTGCTCCCGTAAGCCTGAGGGAAATCAGCCTGGATGAAAACAGCCGTATGAAAACGGGGATCGGCGAGCTGGACAGA
GTCCTGGGCGGGGGAATTGTACCGGGATCACTGACGCTTGTGGGCGGAGACCCTGGAATCGGAAAATCCACGCTGCTCCT
TCAGGTGTGCAAACAGCTATCGGATGCCGGGAGAAGTGTTCTCTATGTATCGGGCGAAGAATCATTGCAGCAGATTAAGA
TGCGGGCGGTTCGGATCGGCACATTTCAGGATGGTCTGAAGCTGCTCTGTGAGACGAATTTGGAGACGATCCGAACCTGT
ATTGAAAAGGAACCGCCGCAGGCTGTGGTGATTGATTCTATTCAGACGATGTATAATGAACAGGTATCGTCATCGCCGGG
AAGTGTTTCGCAGGTCAGGGAATCTACAGGCGTTTTGCTTCAGATTGCCAAGGGACTTCAGGTTCCCGTATTTATAGTCG
GCCATGTGACCAAGGATGGCAGTGTGGCAGGGCCGAGAGTGTTGGAGCATATGGTGGACACGGTTCTGTATTTTGAAGGG
GACCGCCATGCTTCTTACAGGATCTTAAGAGCTGTGAAGAACCGGTTTGGGTCCACCAATGAGATAGGAGTCTTCGAAAT
GCGCCAGGAAGGGCTTATGGAGGTGAAGAATCCGTCAGAGTTTATGCTGGATGGTAAGCCGGAGGGAGCGTCAGGCTCTG
TGGTGGCCTGTTCACTGGAGGGCAGCCGCCCGATTATGATTGAGATACAGGCGCTGGTCTGTCACAGTAATTTCGGTATC
CCCAGGAGAACCGCCAATGGAACGGACTTTAACAGGGTCAACCTGCTGATGGCAGTCCTGGAGAAGCGTGCCAGGATGAA
CCTGTCTTCCAGCGACGCCTATGTCAATATAGCCGGCGGCATTAAGATGACGGAGCCTGCGGTGGATCTGGGAATCTTGC
TGGCGATCGCCTCCAGCCAGAAAGATCTTGTGATCAGTGAAAAGACGGTAGTCTTTGGAGAAGTAGGATTAAGCGGCGAG
GTGCGTTCCGTCAGCATGGCAGACCAACGCGTGCAGGAGGCGGAAAAACTGGGTTTCGAGACAGTTATTCTGCCGAAGGT
CTGCATGAAATCTCTTCTGTCTAAGAACAACAAGGGGATACATTTGGTTCCGGTGGAAAATATAAAGGATGCCATCCGTT
TTATCGAAAAAGGACAGGTATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (344-426)

• AAA domain (AAA_25) (71-220)

3D structure

• AlphaFold DB: A0A7G9GDR2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	55.58	99.348	0.552
radA	Streptococcus mitis NCTC 12261	52.318	98.478	0.515
radA	Streptococcus pneumoniae Rx1	52.097	98.478	0.513
radA	Streptococcus pneumoniae D39	52.097	98.478	0.513
radA	Streptococcus pneumoniae R6	52.097	98.478	0.513
radA	Streptococcus pneumoniae TIGR4	52.097	98.478	0.513
radA	Streptococcus mitis SK321	54.46	92.609	0.504