Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H9H53_RS23940 Genome accession   NZ_CP060595
Coordinates   5207064..5207465 (-) Length   133 a.a.
NCBI ID   WP_016712414.1    Uniprot ID   A0AAP7FR54
Organism   Pseudomonas monteilii strain A2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5202064..5212465
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H9H53_RS23925 - 5204013..5206052 (-) 2040 WP_223623663.1 methyl-accepting chemotaxis protein -
  H9H53_RS23930 - 5206100..5206654 (-) 555 WP_012274550.1 chemotaxis protein CheW -
  H9H53_RS23935 pilH 5206651..5207016 (-) 366 WP_016712413.1 twitching motility response regulator PilH -
  H9H53_RS23940 pilG 5207064..5207465 (-) 402 WP_016712414.1 response regulator Regulator
  H9H53_RS23945 gshB 5207619..5208572 (+) 954 WP_028698466.1 glutathione synthase -
  H9H53_RS23950 - 5208664..5209569 (+) 906 WP_016712416.1 energy transducer TonB -
  H9H53_RS23955 - 5209708..5210277 (+) 570 WP_016712417.1 YqgE/AlgH family protein -
  H9H53_RS23960 ruvX 5210277..5210702 (+) 426 WP_012312410.1 Holliday junction resolvase RuvX -
  H9H53_RS23965 pyrR 5210752..5211270 (+) 519 WP_016712418.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  H9H53_RS23970 - 5211283..5212287 (+) 1005 WP_011536054.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14564.84 Da        Isoelectric Point: 6.2220

>NTDB_id=476827 H9H53_RS23940 WP_016712414.1 5207064..5207465(-) (pilG) [Pseudomonas monteilii strain A2]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPGIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFVATQQPAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=476827 H9H53_RS23940 WP_016712414.1 5207064..5207465(-) (pilG) [Pseudomonas monteilii strain A2]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACTGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCGGTATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCTTTCAAGGACACGCCG
GTCATCCTGCTGTCGTCGCGCGACGGCCTGTTCGACAAAGCCCGCGGCCGGGTGGTCGGTTCTGATCAGTTTCTGACCAA
GCCGTTCAGCAAAGAAGAACTGCTCGATGCGATCCGCGCCCACGTGCCCGGTTTTGTCGCAACCCAACAACCCGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632