Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   JZY07_RS09680 Genome accession   NZ_CP071305
Coordinates   1949764..1950498 (-) Length   244 a.a.
NCBI ID   WP_002942356.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1944764..1955498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS09655 (JZY07_09655) rimP 1944954..1945424 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  JZY07_RS09660 (JZY07_09660) - 1945766..1947279 (+) 1514 Protein_1881 IS1182 family transposase -
  JZY07_RS09665 (JZY07_09665) trmB 1947248..1947886 (-) 639 WP_002939002.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  JZY07_RS09670 (JZY07_09670) - 1947883..1948677 (-) 795 WP_024400167.1 phosphotransferase family protein -
  JZY07_RS09675 (JZY07_09675) pptB 1948727..1949767 (-) 1041 WP_024411978.1 ABC transporter permease Regulator
  JZY07_RS09680 (JZY07_09680) pptA 1949764..1950498 (-) 735 WP_002942356.1 ABC transporter ATP-binding protein Regulator
  JZY07_RS09685 (JZY07_09685) - 1950561..1950974 (+) 414 WP_024411979.1 HIT family protein -
  JZY07_RS09690 (JZY07_09690) - 1950976..1951290 (+) 315 WP_024411980.1 hypothetical protein -
  JZY07_RS09695 (JZY07_09695) - 1951244..1952944 (-) 1701 WP_105202203.1 IS1182 family transposase -
  JZY07_RS09700 (JZY07_09700) - 1953325..1954518 (-) 1194 WP_002939198.1 LCP family protein -
  JZY07_RS09705 (JZY07_09705) - 1954515..1955042 (-) 528 Protein_1890 GNAT family N-acetyltransferase -
  JZY07_RS09710 (JZY07_09710) tsaE 1955035..1955475 (-) 441 WP_024412041.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26832.10 Da        Isoelectric Point: 4.3606

>NTDB_id=476718 JZY07_RS09680 WP_002942356.1 1949764..1950498(-) (pptA) [Streptococcus suis strain SC183]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=476718 JZY07_RS09680 WP_002942356.1 1949764..1950498(-) (pptA) [Streptococcus suis strain SC183]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCGGTTTTGAAAGATGTATCTTTTACGGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACACCTT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAAAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGCTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGACTTGATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGAACTTCCATTCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAACTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAACGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721