Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   JZY07_RS04160 Genome accession   NZ_CP071305
Coordinates   832255..832737 (-) Length   160 a.a.
NCBI ID   WP_024412352.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 827255..837737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS04135 (JZY07_04135) pheT 827570..829969 (+) 2400 WP_024412357.1 phenylalanine--tRNA ligase subunit beta -
  JZY07_RS04140 (JZY07_04140) - 830022..830288 (+) 267 WP_024412356.1 DUF2087 domain-containing protein -
  JZY07_RS04145 (JZY07_04145) - 830309..830611 (-) 303 WP_024412355.1 hypothetical protein -
  JZY07_RS04150 (JZY07_04150) - 830804..831547 (+) 744 WP_024412354.1 polyphosphate polymerase domain-containing protein -
  JZY07_RS04155 (JZY07_04155) - 831534..832211 (+) 678 WP_024412353.1 DUF4956 domain-containing protein -
  JZY07_RS04160 (JZY07_04160) mutX 832255..832737 (-) 483 WP_024412352.1 8-oxo-dGTP diphosphatase Machinery gene
  JZY07_RS04165 (JZY07_04165) folE 832895..833458 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  JZY07_RS04170 (JZY07_04170) folP 833467..834279 (+) 813 WP_024412351.1 dihydropteroate synthase -
  JZY07_RS04175 (JZY07_04175) folB 834272..834634 (+) 363 WP_014735766.1 dihydroneopterin aldolase -
  JZY07_RS04180 (JZY07_04180) folK 834631..835119 (+) 489 WP_024387464.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  JZY07_RS04185 (JZY07_04185) - 835170..836480 (+) 1311 WP_024412350.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18440.77 Da        Isoelectric Point: 4.5422

>NTDB_id=476685 JZY07_RS04160 WP_024412352.1 832255..832737(-) (mutX) [Streptococcus suis strain SC183]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHAIKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQAWLLENKPFFSACFRYDGDSLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=476685 JZY07_RS04160 WP_024412352.1 832255..832737(-) (mutX) [Streptococcus suis strain SC183]
ATGACCAAGAAACCTGTCCAACTGGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAATGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGCGAAACACCACAGGCTTGTG
CCATTCGAGAAGTCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTATAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTTTGATTGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACTTGGGAAGGCGATCGCCATTTTCAAGCATGGCTATTAG
AGAACAAACCCTTCTTTTCCGCTTGCTTCCGCTATGACGGGGATAGCTTGCTGGATTACAGCGTTGATTTTTATGAGGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

78.431

95.625

0.75