Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   JZY07_RS02360 Genome accession   NZ_CP071305
Coordinates   445122..445898 (+) Length   258 a.a.
NCBI ID   WP_024411817.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 440122..450898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS02345 (JZY07_02345) - 440597..440701 (+) 105 Protein_415 IS3 family transposase -
  JZY07_RS11535 - 441942..443414 (+) 1473 WP_024378623.1 plasmid recombination protein -
  JZY07_RS02355 (JZY07_02355) rlmD 443735..445084 (-) 1350 Protein_417 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  JZY07_RS02360 (JZY07_02360) recX 445122..445898 (+) 777 WP_024411817.1 recombination regulator RecX Regulator
  JZY07_RS02365 (JZY07_02365) - 445974..446507 (+) 534 WP_004194106.1 DUF402 domain-containing protein -
  JZY07_RS02370 (JZY07_02370) - 446565..446882 (+) 318 WP_024411818.1 DUF960 domain-containing protein -
  JZY07_RS02375 (JZY07_02375) - 446982..447707 (+) 726 WP_029743144.1 GntR family transcriptional regulator -
  JZY07_RS02380 (JZY07_02380) - 447853..448563 (-) 711 WP_024411819.1 GntR family transcriptional regulator -
  JZY07_RS02385 (JZY07_02385) - 448770..450542 (+) 1773 WP_024411820.1 beta-galactosidase family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30469.03 Da        Isoelectric Point: 9.2585

>NTDB_id=476670 JZY07_RS02360 WP_024411817.1 445122..445898(+) (recX) [Streptococcus suis strain SC183]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTKKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDNYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELAGKIGEK
LVVRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQAL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=476670 JZY07_RS02360 WP_024411817.1 445122..445898(+) (recX) [Streptococcus suis strain SC183]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGCAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGCGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCAAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTTAAGATTGTGACGGTATTAGAAGAAGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAACTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGTCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGACTGGCTGAGGAAGATTTTTCAGAGCTTGCTGGGAAGATTGGGGAGAAG
TTGGTGGTTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGGAAGGGTTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGATTTAATTGCCA
AGGAACTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTATGAATTGAAGCAAAGGTTGATACAGGCTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.206

100

0.364