Detailed information NTG0476590

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: JWY36_RS13940
• Genome accession: NZ_CP071276
• Coordinates: 2571710..2572975 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JNFE0126
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2566710..2577975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWY36_RS13920 (JWY36_13790)	yrrB	2568081..2568701 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
JWY36_RS13925 (JWY36_13795)	mnmA	2568787..2569902 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
JWY36_RS13930 (JWY36_13800)	iscSA	2569933..2571072 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
JWY36_RS13935 (JWY36_13805)	cymR	2571091..2571507 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
JWY36_RS13940 (JWY36_13810)	rarA	2571710..2572975 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
JWY36_RS13945 (JWY36_13815)	tcdA	2573015..2573779 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
JWY36_RS13955 (JWY36_13825)	aspS	2574114..2575892 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
JWY36_RS13960 (JWY36_13830)	hisS	2575906..2577180 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
JWY36_RS13965 (JWY36_13835)	yrzK	2577562..2577732 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=476590 JWY36_RS13940 WP_014480427.1 2571710..2572975(+) (rarA) [Bacillus subtilis strain JNFE0126]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=476590 JWY36_RS13940 WP_014480427.1 2571710..2572975(+) (rarA) [Bacillus subtilis strain JNFE0126]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993