Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JYA73_RS00125 Genome accession   NZ_CP071104
Coordinates   31361..32161 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain PS/BAC/317/16/W     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 26361..37161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JYA73_RS00110 (JYA73_000022) walK 27031..28857 (+) 1827 WP_000871610.1 cell wall metabolism sensor histidine kinase WalK -
  JYA73_RS00115 (JYA73_000023) yycH 28850..30184 (+) 1335 WP_001060146.1 two-component system activity regulator YycH -
  JYA73_RS00120 (JYA73_000024) yycI 30185..30973 (+) 789 WP_001104171.1 two-component system regulatory protein YycI -
  JYA73_RS00125 (JYA73_000025) vicX 31361..32161 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  JYA73_RS00130 (JYA73_000026) adsA 32388..34706 (+) 2319 WP_000645754.1 LPXTG-anchored adenosine synthase AdsA -
  JYA73_RS00135 (JYA73_000027) rlmH 35074..35553 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JYA73_RS00140 (JYA73_000028) - 35652..36587 (+) 936 WP_000251225.1 dsDNA nuclease domain-containing protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=476236 JYA73_RS00125 WP_000088649.1 31361..32161(+) (vicX) [Staphylococcus aureus strain PS/BAC/317/16/W]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=476236 JYA73_RS00125 WP_000088649.1 31361..32161(+) (vicX) [Staphylococcus aureus strain PS/BAC/317/16/W]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAAAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474