Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JS609_RS20790 Genome accession   NZ_CP071043
Coordinates   4027157..4027951 (-) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis isolate ELA2001105     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4022157..4032951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JS609_RS20765 (JS609_04081) - 4023270..4023953 (-) 684 WP_024573086.1 response regulator transcription factor -
  JS609_RS20770 (JS609_04082) - 4024165..4025064 (+) 900 WP_225722168.1 PepSY domain-containing protein -
  JS609_RS20775 (JS609_04083) - 4025226..4025726 (+) 501 WP_003226943.1 PepSY domain-containing protein -
  JS609_RS20780 - 4025723..4025852 (-) 130 Protein_4055 hypothetical protein -
  JS609_RS20785 (JS609_04084) htrA 4025873..4027075 (-) 1203 WP_003226941.1 serine protease HtrC Regulator
  JS609_RS20790 (JS609_04085) vicX 4027157..4027951 (-) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  JS609_RS20795 (JS609_04086) walI 4027973..4028815 (-) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  JS609_RS20800 (JS609_04087) walH 4028802..4030169 (-) 1368 WP_225722169.1 WalRK two-component regulatory system regulator WalH -
  JS609_RS20805 (JS609_04088) walK 4030159..4031994 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  JS609_RS20810 (JS609_04089) walR 4032002..4032709 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=475898 JS609_RS20790 WP_003226939.1 4027157..4027951(-) (vicX) [Bacillus subtilis isolate ELA2001105]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=475898 JS609_RS20790 WP_003226939.1 4027157..4027951(-) (vicX) [Bacillus subtilis isolate ELA2001105]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTTTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53