Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   H8S71_RS07570 Genome accession   NZ_CP060417
Coordinates   1448903..1449367 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1443903..1454367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS07550 (H8S71_07545) kinA 1444370..1446190 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  H8S71_RS07555 (H8S71_07550) dapX 1446200..1447381 (-) 1182 WP_021479391.1 aminotransferase A -
  H8S71_RS07560 (H8S71_07555) - 1447583..1447744 (-) 162 WP_014476654.1 hypothetical protein -
  H8S71_RS20655 - 1447805..1447999 (+) 195 WP_350308467.1 hypothetical protein -
  H8S71_RS07565 (H8S71_07560) cheV 1447948..1448859 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  H8S71_RS07570 (H8S71_07565) kre 1448903..1449367 (-) 465 WP_003232406.1 YkyB family protein Regulator
  H8S71_RS07575 (H8S71_07570) ykuC 1449493..1450785 (-) 1293 WP_134991534.1 MFS transporter -
  H8S71_RS07580 (H8S71_07575) ltdD 1450861..1451355 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  H8S71_RS07585 (H8S71_07580) ppeE 1451412..1452272 (-) 861 WP_003232400.1 metallophosphoesterase -
  H8S71_RS07590 (H8S71_07585) fadH 1452415..1453179 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=475881 H8S71_RS07570 WP_003232406.1 1448903..1449367(-) (kre) [Bacillus subtilis subsp. subtilis strain ONU 559]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=475881 H8S71_RS07570 WP_003232406.1 1448903..1449367(-) (kre) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1