Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H8S71_RS04505 Genome accession   NZ_CP060417
Coordinates   891059..891853 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 886059..896853
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS04475 (H8S71_04470) sxzA 886898..887929 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  H8S71_RS04480 (H8S71_04475) yfhB 888044..888925 (+) 882 WP_169038028.1 PhzF family phenazine biosynthesis isomerase -
  H8S71_RS04485 (H8S71_04480) yfhC 889013..889597 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  H8S71_RS04490 (H8S71_04485) yfhD 889636..889827 (-) 192 WP_003233561.1 YfhD family protein -
  H8S71_RS04495 (H8S71_04490) yfhE 889894..890004 (-) 111 WP_003223230.1 YfhE family protein -
  H8S71_RS04500 (H8S71_04495) yfhF 890059..890970 (-) 912 WP_169038027.1 TIGR01777 family oxidoreductase -
  H8S71_RS04505 (H8S71_04500) recX 891059..891853 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  H8S71_RS04510 (H8S71_04505) yfhH 891855..892169 (+) 315 WP_049140592.1 YfhH family protein -
  H8S71_RS04515 (H8S71_04510) yfhI 892312..893505 (+) 1194 WP_003243500.1 MFS transporter -
  H8S71_RS04520 (H8S71_04515) sspK 893537..893689 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  H8S71_RS04525 (H8S71_04520) yfhJ 893814..894083 (+) 270 WP_003243789.1 YfhJ family protein -
  H8S71_RS04530 (H8S71_04525) yfhK 894227..894745 (+) 519 WP_101501788.1 SH3 domain-containing protein -
  H8S71_RS04535 (H8S71_04530) spdL 894830..895147 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  H8S71_RS04540 (H8S71_04535) ephM 895149..896009 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=475864 H8S71_RS04505 WP_029726844.1 891059..891853(+) (recX) [Bacillus subtilis subsp. subtilis strain ONU 559]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=475864 H8S71_RS04505 WP_029726844.1 891059..891853(+) (recX) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGATATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996