Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   H7A79_RS14025 Genome accession   NZ_CP060414
Coordinates   2717616..2719655 (+) Length   679 a.a.
NCBI ID   WP_187000567.1    Uniprot ID   -
Organism   Neisseria musculi strain NW831     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2712616..2724655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7A79_RS14000 (H7A79_2590) - 2712734..2713540 (+) 807 WP_187000563.1 M48 family metallopeptidase -
  H7A79_RS14005 - 2713547..2713771 (-) 225 WP_135034058.1 hypothetical protein -
  H7A79_RS14010 (H7A79_2591) prmC 2713770..2714600 (+) 831 WP_187000564.1 peptide chain release factor N(5)-glutamine methyltransferase -
  H7A79_RS14015 (H7A79_2592) - 2715035..2715685 (-) 651 WP_187000565.1 HAD-IA family hydrolase -
  H7A79_RS14020 (H7A79_2593) mgtE 2716034..2717479 (+) 1446 WP_187000566.1 magnesium transporter -
  H7A79_RS14025 (H7A79_2594) recG 2717616..2719655 (+) 2040 WP_187000567.1 ATP-dependent DNA helicase RecG Machinery gene
  H7A79_RS14030 - 2719681..2719860 (-) 180 WP_135034063.1 hypothetical protein -
  H7A79_RS14035 (H7A79_2595) - 2720518..2721450 (-) 933 WP_187000568.1 hypothetical protein -
  H7A79_RS14040 (H7A79_2596) argS 2721628..2723346 (-) 1719 WP_187000569.1 arginine--tRNA ligase -
  H7A79_RS14045 - 2724176..2724304 (+) 129 WP_256359850.1 hypothetical protein -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 74890.58 Da        Isoelectric Point: 7.6908

>NTDB_id=475851 H7A79_RS14025 WP_187000567.1 2717616..2719655(+) (recG) [Neisseria musculi strain NW831]
MNPEHQKLLKINDAAAKRLAKLNLCTPWDMVLHLPLRYEDETHIMPIADAPVGTPCQVEGEVVHQEIQFKPRKQLVAQIR
DGSGGVLHLRFIHFYPGHQKQLAAGKRIRAVGEIKHGFYGDEMIHPKIRDAESSSLAESLTPVYPTVNGLNQPTLRRIVQ
AALDSIPLHDTLPNELLGRLKLPHLAESLRLLHAPPPSFTVRQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRISGQAG
PLRGTGEWSHKLLAALPFALTAAQQRVLAEIRTDMQQPHPMHRLLQGDVGSGKTIVAALSALTAVEAGCQVAVMAPTEIL
AEQHYAKFKQWFEPLGLSVAWLSGSQRKKAKEANKAAISDGLTQIAVGTHALFQDDVEFQNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIKTRLVNSARRAEVEGLVLGACKKGQQAYWVCPLIE
ESETLQLQTATETLQTLQTALPELNIGLVHGRMKPAEKAAVMAEFISGRLNVLVATTVIEVGVDVPNASLMVIEHAERMG
LAQLHQLRGRVGRGAAASSCVLLFAEPLSDLAKARLKVIYEHTDGFEIARQDLTIRGPGEFLGARQSGVPMLRFANLEED
LQLLEQARETAALLIEERPDIVEAHLNRWLSSREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=475851 H7A79_RS14025 WP_187000567.1 2717616..2719655(+) (recG) [Neisseria musculi strain NW831]
ATGAACCCCGAACACCAAAAGCTGCTCAAAATCAACGATGCCGCCGCCAAGAGGCTCGCCAAGCTCAATCTTTGCACGCC
GTGGGACATGGTGCTGCACCTGCCGCTGCGCTATGAAGACGAAACACACATCATGCCGATTGCCGATGCGCCGGTCGGCA
CGCCGTGCCAGGTGGAAGGGGAAGTGGTTCATCAAGAAATTCAGTTTAAACCGCGCAAACAGCTGGTTGCGCAGATACGC
GATGGTTCGGGCGGCGTGCTGCATCTGCGCTTTATCCATTTTTACCCCGGCCATCAAAAGCAGCTCGCGGCAGGCAAACG
CATCCGCGCGGTGGGTGAAATCAAACACGGGTTTTACGGCGATGAGATGATACACCCGAAAATACGCGATGCCGAAAGCA
GCAGCCTGGCCGAAAGCCTCACGCCCGTGTATCCCACCGTTAACGGCCTCAACCAGCCCACGCTGCGCCGCATCGTTCAG
GCGGCCTTAGACAGCATTCCCCTTCACGATACCCTGCCAAACGAATTATTAGGCCGTCTGAAACTGCCGCATTTGGCCGA
AAGCCTGCGCCTGCTGCACGCGCCGCCGCCGAGTTTCACCGTTCGGCAGCTTTCAGACGGCACCCTGCCCGCCTGGCAGC
GGTTGAAGTTTGACGAGTTGCTTGCGCAGCAGCTTTCGATGCGGCTGGCGCGGCAGAAACGCATCAGCGGGCAGGCCGGG
CCTTTGCGCGGCACGGGCGAATGGTCGCACAAACTGCTCGCCGCGCTGCCGTTTGCGCTTACCGCCGCCCAGCAGCGCGT
ATTGGCCGAAATCCGCACCGATATGCAGCAGCCCCACCCCATGCACCGCCTGCTGCAAGGCGATGTGGGCAGCGGCAAAA
CCATCGTGGCCGCGCTGTCGGCACTCACCGCCGTTGAGGCAGGATGCCAGGTGGCGGTGATGGCGCCCACTGAAATTCTG
GCCGAACAGCACTACGCCAAGTTCAAACAATGGTTCGAGCCGCTGGGTTTGAGCGTGGCATGGCTCTCCGGCAGCCAGCG
CAAAAAGGCCAAAGAAGCCAATAAAGCCGCCATTTCAGACGGCCTCACCCAAATCGCAGTCGGCACACACGCCCTGTTTC
AAGACGATGTTGAATTTCAAAATCTCGGTTTGGTGATTGTCGATGAGCAGCACCGTTTCGGCGTGGCGCAGCGTTTGGCC
TTAAAAAACAAAGGGCAGGATGTGCACCAACTGATGATGTCGGCCACCCCCATTCCGCGCACGCTGGCCATGAGCTTTTT
CGCCGACCTTGATGTTTCGGTGATTGACGAGCTGCCGCCCAACCGCACCCCGATTAAAACCCGCCTGGTGAACAGCGCGC
GCCGCGCCGAAGTGGAAGGGCTGGTGTTGGGCGCATGCAAAAAAGGACAGCAGGCCTATTGGGTTTGCCCGCTGATTGAA
GAAAGCGAAACCCTGCAACTGCAAACCGCCACCGAAACCCTGCAAACACTTCAGACGGCCTTGCCCGAACTGAACATCGG
CCTGGTGCACGGGCGCATGAAACCTGCCGAAAAAGCCGCCGTGATGGCTGAATTTATCTCAGGCCGTCTGAATGTGTTGG
TGGCCACCACCGTGATTGAAGTGGGCGTGGACGTGCCCAACGCCAGCCTGATGGTGATTGAGCACGCCGAGCGCATGGGC
CTGGCGCAACTGCACCAACTGCGCGGCAGGGTGGGGCGCGGCGCCGCCGCCAGCTCCTGCGTGCTGCTGTTTGCCGAACC
ATTGAGCGACTTGGCCAAAGCGCGCCTGAAAGTGATTTACGAGCACACAGACGGCTTTGAAATCGCCCGCCAAGATTTAA
CCATACGCGGCCCCGGAGAATTTCTCGGCGCCCGCCAAAGCGGTGTGCCCATGCTGCGCTTTGCCAATCTTGAAGAAGAT
TTGCAGCTTTTAGAGCAAGCCCGCGAAACCGCTGCCCTGCTGATTGAAGAGCGGCCGGACATCGTTGAAGCACATTTAAA
CCGCTGGCTCTCGAGCAGGGAAGGGTATTTGGGGGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(264-418)

RecG wedge domain (RecG_wedge)

(12-164)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-665)

Helicase conserved C-terminal domain (Helicase_C)

(467-574)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

82.18

100

0.822