Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Machinery gene
Locus tag   H7A79_RS08440 Genome accession   NZ_CP060414
Coordinates   1618888..1621116 (-) Length   742 a.a.
NCBI ID   WP_186999937.1    Uniprot ID   A0A7H1M9H8
Organism   Neisseria musculi strain NW831     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 1613888..1626116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7A79_RS08420 (H7A79_1556) upp 1614014..1614640 (-) 627 WP_186999935.1 uracil phosphoribosyltransferase -
  H7A79_RS08425 (H7A79_1557) - 1615162..1616499 (-) 1338 WP_135036758.1 anaerobic C4-dicarboxylate transporter -
  H7A79_RS08430 (H7A79_1558) grcA 1616770..1617156 (+) 387 WP_186999936.1 autonomous glycyl radical cofactor GrcA -
  H7A79_RS08435 (H7A79_1559) - 1617334..1618599 (-) 1266 WP_246407829.1 endonuclease/exonuclease/phosphatase family protein -
  H7A79_RS08440 (H7A79_1560) comA 1618888..1621116 (-) 2229 WP_186999937.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  H7A79_RS08445 (H7A79_1561) gcvP 1621528..1624383 (-) 2856 WP_186999938.1 aminomethyl-transferring glycine dehydrogenase -
  H7A79_RS08450 (H7A79_1562) - 1624607..1625347 (-) 741 WP_186999939.1 UDP-2,3-diacylglucosamine diphosphatase -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 80483.08 Da        Isoelectric Point: 10.3076

>NTDB_id=475833 H7A79_RS08440 WP_186999937.1 1618888..1621116(-) (comA) [Neisseria musculi strain NW831]
MPKPWLLLWAAGVAASFALPAVPSWTLLAAVWLCLLVSAWRFRAAAWLLLCLSGALYGIWRTQSALDKQWPLFQTAPAAL
TIEVADLQRRDDQRVRFTAKAVDGGGRQYRLQLADYQLRDWPAGSRWQVQARVRPPVGEANRVGVNREAWALSNGIGGVG
TIGKERQALPGGSPPLLLRWREYISRRWQHTDTHGQDFSDGLALMRALGIGEQSALSGQAWQSFRPLGLNHLVSISGLHV
GMVAVLAGWLAKCGLRVLPQVPATPRLWVLAAGLSAAVCYAGLAGFAVPTQRSVLMLLALAWAWWRGSGASAWRGWQQAL
AWVLLFDPTAVLGAGFWLSFGLVGALLWASAGRLNEHGLRVAVRAQWAVTAVSVVALGSLFASLPLLSPLVNAVAIPWFS
WVLVPLALAASLLPLAPLQWLAAAAGEYTLRLVKLVAQAAPEYVVAAAPPLLLPLAVAAALTVLLPRGSGWRPWGWLVLA
GFVFYRPSVPQPGRLNVTVWDAGQGLSVWMQTRNHNLLFDTGTETVAAAQILPNLNAAGVRRLDALVLSHHDADHDGGFT
ALVQAKKPREILAGQPQFYPQAELCREKQWQWDGVYFEWLRPSENKTAQDNDQSCVLRAVAGGQALLVTGDLGRRGEREL
VEQYGRGLLSQVLVLGHHGSDSSSSSAFLNVVSPQYAVASSGFANAYKHPAAAVQNRVKAHGATLLRTDLSGALVFELGA
GEEVFQGRLKKAKFYWEKKPFE

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=475833 H7A79_RS08440 WP_186999937.1 1618888..1621116(-) (comA) [Neisseria musculi strain NW831]
ATGCCGAAACCGTGGCTGCTGCTGTGGGCGGCGGGCGTTGCCGCTTCGTTCGCCCTGCCTGCCGTGCCTTCTTGGACGCT
ATTGGCAGCGGTATGGCTGTGTCTGCTGGTATCGGCTTGGCGGTTTCGGGCGGCGGCGTGGCTGCTGTTGTGTTTGAGTG
GTGCCTTATACGGCATCTGGCGCACGCAGTCGGCGCTGGATAAACAATGGCCGCTGTTTCAGACGGCTCCGGCGGCCTTA
ACCATCGAAGTAGCAGATTTGCAGCGGCGCGATGATCAGCGGGTGCGTTTCACGGCAAAAGCGGTGGACGGCGGCGGGCG
GCAATACCGCCTGCAGTTGGCAGACTACCAACTGCGCGACTGGCCGGCGGGCAGCCGCTGGCAGGTGCAGGCACGGGTGA
GGCCGCCGGTAGGCGAGGCAAACCGTGTCGGCGTCAACCGCGAAGCGTGGGCTTTGAGCAACGGCATCGGCGGCGTGGGC
ACGATCGGTAAAGAGCGGCAGGCGCTGCCCGGCGGCAGCCCGCCGCTGCTGCTGCGGTGGCGGGAATACATCAGCCGCCG
CTGGCAACACACCGATACACACGGGCAGGATTTTTCAGACGGCCTTGCCTTGATGCGGGCGTTGGGCATAGGCGAGCAGT
CGGCCTTGAGCGGGCAGGCGTGGCAGTCGTTCCGGCCTTTGGGGTTGAACCATCTGGTGAGCATTTCCGGCCTGCATGTG
GGCATGGTGGCAGTATTGGCGGGCTGGCTGGCGAAATGCGGGTTGCGGGTGTTGCCGCAGGTGCCGGCAACACCGCGCCT
TTGGGTGCTGGCGGCAGGTTTGTCGGCGGCGGTGTGTTATGCGGGTTTGGCAGGGTTTGCGGTGCCGACCCAGCGCAGTG
TGCTGATGCTGCTGGCGTTGGCATGGGCATGGTGGCGGGGGAGCGGCGCATCGGCGTGGAGGGGTTGGCAGCAGGCGTTG
GCTTGGGTGTTGCTGTTTGATCCGACTGCGGTTTTGGGCGCGGGGTTTTGGCTGTCGTTCGGTTTGGTGGGGGCGTTGCT
GTGGGCTTCGGCAGGCCGTCTGAACGAGCACGGGCTGCGGGTGGCGGTGCGCGCGCAATGGGCGGTAACGGCGGTGTCTG
TGGTGGCACTGGGCAGCCTGTTTGCTTCGCTGCCGCTGTTGAGCCCATTGGTAAACGCGGTAGCGATTCCGTGGTTTTCG
TGGGTATTGGTGCCGTTGGCGCTGGCCGCTTCGCTGCTGCCGTTGGCGCCTTTGCAGTGGCTGGCGGCTGCGGCGGGCGA
ATATACGCTGCGGCTGGTGAAGCTGGTGGCGCAGGCTGCGCCCGAATATGTCGTGGCTGCTGCACCGCCGTTGTTATTGC
CGCTGGCGGTGGCGGCGGCTTTAACCGTGTTGCTGCCGCGCGGCTCGGGTTGGAGGCCGTGGGGGTGGCTGGTGTTGGCG
GGTTTTGTGTTTTACCGCCCGAGCGTGCCGCAGCCGGGCCGTCTGAACGTTACCGTTTGGGATGCGGGACAGGGTTTGTC
GGTGTGGATGCAAACCCGCAACCATAATTTGTTGTTCGACACGGGCACCGAAACGGTTGCAGCCGCGCAGATTCTGCCCA
ATCTGAATGCGGCGGGCGTGCGCCGTTTGGACGCGCTGGTGTTGTCGCACCACGATGCCGACCACGACGGCGGTTTTACA
GCTTTAGTGCAGGCCAAAAAACCGCGCGAAATTCTGGCGGGGCAGCCGCAGTTTTACCCGCAGGCGGAGCTTTGCAGAGA
AAAACAATGGCAATGGGACGGCGTGTATTTTGAATGGCTCAGGCCGTCTGAAAACAAAACGGCGCAGGATAACGACCAAA
GCTGCGTTCTGCGCGCAGTGGCGGGCGGGCAGGCGCTGCTGGTAACGGGCGATTTGGGGCGGCGCGGCGAGCGGGAGCTG
GTGGAACAATACGGCAGGGGGTTGCTCAGCCAGGTGTTGGTGTTGGGGCATCACGGCAGCGACTCTTCATCATCGAGTGC
GTTTCTCAACGTGGTGTCGCCGCAATATGCCGTGGCTTCCAGCGGCTTTGCCAATGCCTACAAACACCCTGCCGCTGCGG
TGCAAAACCGTGTGAAGGCGCACGGCGCAACTTTGTTGAGAACAGATTTGTCGGGCGCGCTGGTGTTTGAATTGGGGGCG
GGAGAAGAGGTGTTTCAAGGCCGTCTGAAAAAGGCTAAGTTTTATTGGGAGAAGAAGCCGTTTGAATAA

Domains

Predicted by InterproScan.

Competence protein (Competence)

(209-465)

Metallo-beta-lactamase superfamily (Lactamase_B)

(502-649)

Domain of unknown function (DUF4131) (DUF4131)

(25-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H1M9H8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Neisseria gonorrhoeae MS11

62.097

100

0.623