Detailed information    

insolico Bioinformatically predicted

Overview

Name   recB   Type   Machinery gene
Locus tag   H7A79_RS08065 Genome accession   NZ_CP060414
Coordinates   1534740..1538390 (+) Length   1216 a.a.
NCBI ID   WP_186999896.1    Uniprot ID   A0A7H1MBQ0
Organism   Neisseria musculi strain NW831     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1529740..1543390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7A79_RS08030 (H7A79_1483) - 1530575..1531234 (-) 660 WP_186999892.1 tetratricopeptide repeat protein -
  H7A79_RS08035 (H7A79_1484) - 1531248..1531916 (-) 669 WP_186999893.1 class I SAM-dependent methyltransferase -
  H7A79_RS08040 (H7A79_1485) - 1531942..1532127 (-) 186 WP_135033744.1 DUF3460 family protein -
  H7A79_RS08045 - 1532164..1532316 (-) 153 WP_186999894.1 hypothetical protein -
  H7A79_RS08050 (H7A79_1486) pcnB 1532589..1533935 (+) 1347 WP_186999895.1 polynucleotide adenylyltransferase PcnB -
  H7A79_RS08055 (H7A79_1487) - 1533943..1534188 (+) 246 WP_228068095.1 glutaredoxin family protein -
  H7A79_RS08060 (H7A79_1488) - 1534324..1534593 (+) 270 WP_135033626.1 DUF1040 family protein -
  H7A79_RS08065 (H7A79_1489) recB 1534740..1538390 (+) 3651 WP_186999896.1 exodeoxyribonuclease V subunit beta Machinery gene
  H7A79_RS08070 (H7A79_1490) bfr 1538820..1539293 (-) 474 WP_186999897.1 bacterioferritin -
  H7A79_RS08075 (H7A79_1491) bfr 1539318..1539782 (-) 465 WP_135033619.1 bacterioferritin -
  H7A79_RS08080 (H7A79_1492) typA 1540226..1542037 (+) 1812 WP_186999898.1 translational GTPase TypA -

Sequence

Protein


Download         Length: 1216 a.a.        Molecular weight: 135420.71 Da        Isoelectric Point: 6.6392

>NTDB_id=475831 H7A79_RS08065 WP_186999896.1 1534740..1538390(+) (recB) [Neisseria musculi strain NW831]
MHAQPFDPLAIAVEGTNLIEASAGTGKTYNIAALFTRLIVLEKMPVESILVVTFTKAATAELKTRLRARLDDALSALEHG
GTSDGLQNHYLSRHPGDGFILPLLQQALQHESRERLMVRLQAAISRFDNASIYTIHGFCQRLLRDYAFLCQVPFDVSLTG
DTRERLLTPAQDFWREKVSPNPLLAQLVFKNRQTPQTALAAVKHFTGRPYLVFRRPESDLAASYAAAEQSWQEIRTALPA
LEEKFWTLFATVLNGTYFKKPSYQELFATLQQAAAHNRLPEVPQEAKKKEDFFKRLENLSAETLPGKIKKGKTLDAQTQA
GFDKLAAFGRQLAGIAQTEQNALAALYFDLLDYLAAALAEHKKNHRERVFDDLLLDVYHALATGAHADALAQAAAADWQA
ALIDEFQDTDPLQYTIFSRLFAGQNRPLFLVGDPKQAIYSFRGADIHAYLQAAHDAGKRYTLAVNHRSHGKLIRSINALF
RLKNRPFVIDHIGYADVGASRETCRLNAGGSAIQVRWLNRPDENSNKDMLRSRAAAYCADEIAGLLNQAAAGRLNYRKHP
DDAGKPLQSGQIAVLVRTYNEGRMAAAELKKRGIQSVLLSRESVFATEEAAAVAALLGFWLQPHDTGPLRFVLGGVLFNQ
TAAELYALNRDENSLLEWMASAHDAAETWQQYGIYAAMQQFAARHGIEERLLAEGNERSLTNYHQIIERLAEESGHNLGP
APLHQWLLSQIQTAADNTAHPDNNLLRLESDENLVQIVTMHAAKGLQYPVVFCPFVWDSKKPENHWQILHRNGQAELLAP
HQPDEADSSRLADENLSENLRLLYVALTRAEERLTVYAAHCSDTPRNPLAYLLEGGTDAGRAETEAAYTAAAKTERAAKL
KRNWQQFIANAPPNTDFAFTEDIPPAANYRPPAASDGRYLAQNLPVRLFETINHTSFTGLSRQTRHRSGDREQAGEELQP
TIDLAETGDAPVFRPSENPPSPGGRDIHAFARGADAGVCLHEILEQFDFSTPASDQSDLVRTVLERYGFEPHWQQAVETM
LDHTRSAPLGSGTLADTPTKRRRAEMAFTLHMHDFTLKHLQQWFARPDNGLPAECAAAAQLLDFNDVKGFLNGFIDMVCL
HSDGLVTLIDYKSNHLGPTAADYHQAAMNEAVAHHHYYLQALIYAIAAARYFRSRQQPVQKIAVRYLFLRGLNGSGNGIW
AWDFDIGLLSGWLENG

Nucleotide


Download         Length: 3651 bp        

>NTDB_id=475831 H7A79_RS08065 WP_186999896.1 1534740..1538390(+) (recB) [Neisseria musculi strain NW831]
ATGCACGCACAGCCGTTTGACCCGCTCGCCATTGCCGTTGAAGGCACCAACCTGATTGAAGCCTCGGCCGGCACAGGCAA
AACCTACAACATCGCCGCCCTCTTCACCCGCCTGATTGTGCTCGAAAAAATGCCGGTGGAAAGCATATTGGTGGTTACGT
TTACCAAAGCTGCCACCGCCGAGCTGAAAACCCGCCTGCGCGCGCGCTTGGACGATGCCTTGTCGGCGTTGGAACACGGC
GGCACTTCAGACGGCCTGCAAAACCACTACCTCAGCCGCCACCCCGGCGACGGCTTTATCCTGCCGCTGCTGCAGCAAGC
CCTGCAGCACGAAAGCCGCGAAAGGCTGATGGTTCGCCTGCAGGCCGCCATCAGTCGATTCGACAATGCCTCGATTTACA
CCATACACGGCTTCTGCCAGCGGCTGCTGCGCGACTATGCCTTTTTGTGCCAAGTGCCGTTCGATGTCTCGCTCACCGGC
GACACCCGCGAACGCCTGCTCACGCCCGCGCAGGATTTCTGGCGCGAAAAAGTGTCGCCCAACCCGTTGTTGGCACAATT
GGTGTTCAAAAACCGGCAAACCCCGCAAACCGCGCTGGCGGCCGTCAAACACTTTACCGGCCGCCCTTATTTGGTTTTCA
GACGGCCTGAGAGCGATTTAGCCGCAAGCTACGCTGCGGCAGAACAAAGCTGGCAGGAAATCCGCACCGCCCTGCCCGCT
TTGGAAGAAAAATTCTGGACGCTGTTTGCCACCGTTTTAAACGGCACCTATTTCAAAAAGCCTTCCTATCAAGAACTCTT
CGCCACCCTGCAACAGGCCGCCGCACACAACCGCCTGCCCGAGGTGCCGCAAGAAGCCAAGAAAAAGGAAGATTTTTTCA
AACGTTTGGAAAACCTTTCTGCCGAAACCCTGCCCGGCAAAATCAAAAAAGGCAAAACGCTAGATGCCCAAACGCAGGCC
GGGTTCGACAAACTGGCCGCGTTCGGCCGCCAACTGGCCGGCATTGCCCAAACCGAACAAAACGCCCTTGCCGCCCTTTA
TTTCGATCTGCTCGACTATCTTGCCGCCGCGCTGGCCGAACACAAAAAAAACCACCGCGAGCGGGTGTTTGACGATTTAC
TGCTCGATGTTTACCACGCCCTCGCCACCGGCGCACACGCCGATGCGCTGGCGCAAGCTGCCGCAGCCGACTGGCAGGCC
GCACTGATAGACGAATTCCAAGACACCGACCCGCTGCAATACACCATCTTCAGCCGTCTGTTTGCCGGGCAAAACCGCCC
GCTGTTTTTGGTGGGCGACCCCAAACAGGCCATTTACAGCTTTCGCGGCGCCGATATCCACGCCTATCTGCAGGCCGCGC
ACGATGCCGGCAAACGCTACACGCTGGCAGTCAACCACCGCAGCCACGGTAAGCTGATACGCAGCATCAACGCCCTTTTC
CGGCTAAAAAACCGCCCGTTCGTCATCGACCATATCGGCTATGCCGATGTGGGTGCCTCACGCGAAACCTGCCGTCTGAA
CGCCGGCGGCAGCGCCATACAGGTGCGCTGGCTCAACCGCCCCGATGAAAACAGCAACAAAGACATGCTGCGCAGCCGTG
CCGCCGCATACTGCGCCGATGAAATCGCCGGCCTGCTCAACCAAGCCGCAGCAGGCCGTCTGAACTACCGCAAACATCCC
GATGATGCCGGAAAACCGCTGCAGTCGGGGCAGATTGCCGTATTGGTGCGCACCTACAACGAAGGGCGGATGGCGGCCGC
CGAATTGAAAAAACGCGGCATTCAAAGCGTGTTGTTAAGCCGCGAATCGGTGTTTGCCACCGAAGAAGCCGCAGCCGTTG
CCGCCCTGCTCGGCTTTTGGCTGCAGCCGCACGACACCGGGCCGCTGCGTTTCGTGCTCGGCGGCGTGCTGTTCAACCAA
ACAGCCGCCGAACTCTACGCCCTCAACCGTGATGAAAACAGCCTGCTCGAATGGATGGCATCGGCACACGATGCTGCCGA
AACCTGGCAGCAATACGGCATTTACGCCGCCATGCAGCAGTTTGCCGCGCGCCACGGCATTGAAGAGCGGCTGCTGGCCG
AAGGCAACGAACGCAGCCTCACCAACTATCACCAGATTATCGAAAGGCTGGCCGAAGAAAGCGGACACAACCTCGGCCCC
GCCCCGCTGCACCAATGGCTGCTCTCGCAAATTCAGACGGCCGCCGACAACACCGCCCACCCCGACAACAACCTGCTGCG
GCTGGAAAGCGATGAAAACCTGGTGCAAATCGTAACCATGCACGCCGCCAAAGGCTTGCAGTATCCCGTGGTATTCTGCC
CGTTTGTGTGGGACAGCAAAAAGCCCGAAAACCACTGGCAGATTCTCCACCGCAACGGACAGGCCGAACTGCTCGCCCCC
CACCAGCCCGATGAAGCCGACAGCAGCCGCCTTGCCGATGAAAACCTCAGCGAAAACCTTCGCCTGCTCTACGTTGCCCT
TACCCGTGCCGAAGAGCGCCTGACCGTGTATGCCGCACATTGCAGCGACACCCCCCGCAACCCGCTGGCCTATCTGCTCG
AAGGCGGCACAGACGCAGGCCGCGCCGAAACCGAAGCTGCCTATACCGCCGCCGCAAAAACCGAGCGGGCCGCCAAATTG
AAGCGCAACTGGCAGCAGTTTATTGCAAACGCCCCCCCCAACACCGATTTTGCGTTCACCGAAGACATACCGCCGGCGGC
AAACTACCGGCCGCCGGCGGCTTCAGACGGCCGCTATCTGGCGCAAAACCTGCCTGTCCGGCTGTTTGAAACCATAAACC
ACACCAGCTTCACCGGTTTAAGCCGCCAAACCCGCCACCGCAGCGGAGATAGGGAGCAGGCCGGCGAAGAGCTGCAACCG
ACCATCGATCTGGCCGAAACCGGTGATGCGCCCGTATTCAGGCCGTCTGAAAACCCACCAAGCCCGGGCGGGCGCGATAT
CCATGCTTTTGCGCGCGGAGCCGATGCCGGCGTTTGCCTGCACGAAATTTTAGAGCAGTTTGACTTTTCCACCCCCGCAT
CCGACCAAAGCGATCTCGTGCGCACCGTCCTTGAACGCTACGGCTTCGAGCCGCATTGGCAGCAGGCCGTTGAAACCATG
CTCGACCACACCCGTTCTGCACCGCTGGGCAGCGGCACGCTCGCCGACACGCCCACAAAACGCCGCCGCGCCGAAATGGC
ATTCACGCTGCATATGCACGACTTCACGCTCAAACACCTGCAGCAATGGTTTGCCCGCCCCGATAACGGCCTGCCCGCCG
AGTGTGCCGCTGCCGCCCAACTCTTGGATTTTAACGATGTAAAAGGCTTTCTCAACGGCTTTATCGATATGGTGTGCCTG
CATTCAGACGGCCTCGTTACCCTAATCGATTATAAGTCCAACCATCTCGGGCCAACCGCCGCCGATTACCACCAGGCGGC
CATGAACGAAGCGGTGGCACACCACCACTATTACCTGCAGGCCTTGATTTACGCCATTGCCGCCGCACGCTATTTCCGTT
CACGGCAACAGCCTGTGCAGAAAATCGCCGTACGCTATCTCTTTCTGCGCGGCCTTAACGGCAGCGGCAACGGCATTTGG
GCTTGGGATTTCGATATCGGGCTGCTGTCCGGCTGGCTGGAAAACGGCTGA

Domains

Predicted by InterproScan.

UvrD/REP helicase N-terminal domain (UvrD-helicase)

(13-455)

UvrD-like helicase C-terminal domain (UvrD_C)

(460-837)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H1MBQ0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recB Neisseria gonorrhoeae strain FA1090

55.674

100

0.557