Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | JS609_RS03725 | Genome accession | NZ_CP071043 |
| Coordinates | 727438..728568 (+) | Length | 376 a.a. |
| NCBI ID | WP_088467558.1 | Uniprot ID | - |
| Organism | Bacillus subtilis isolate ELA2001105 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 722438..733568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JS609_RS03705 (JS609_00732) | yeeF | 722528..724537 (-) | 2010 | WP_213415023.1 | LXG family T7SS effector deoxyribonuclease toxin YeeF | - |
| JS609_RS03710 (JS609_00733) | - | 724704..725042 (+) | 339 | WP_080529027.1 | hypothetical protein | - |
| JS609_RS03715 (JS609_00734) | - | 725055..725975 (+) | 921 | WP_080529028.1 | DUF5655 domain-containing protein | - |
| JS609_RS03720 (JS609_00735) | - | 726130..727290 (+) | 1161 | WP_080529029.1 | lysozyme inhibitor LprI family protein | - |
| JS609_RS03725 (JS609_00736) | rapC | 727438..728568 (+) | 1131 | WP_088467558.1 | response regulator aspartate phosphatase RapH | Regulator |
| JS609_RS03730 (JS609_00737) | phrH | 728558..728731 (+) | 174 | WP_038427496.1 | phosphatase RapH inhibitor PhrH | - |
| JS609_RS03735 (JS609_00738) | yeeI | 728891..729610 (+) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JS609_RS03740 (JS609_00739) | - | 729744..730139 (+) | 396 | WP_113713059.1 | spore coat protein | - |
| JS609_RS03745 (JS609_00740) | yezE | 730253..730837 (+) | 585 | WP_015715467.1 | TetR/AcrR family transcriptional regulator | - |
| JS609_RS03750 (JS609_00741) | yesE | 730916..731359 (+) | 444 | WP_038427500.1 | nuclear transport factor 2 family protein | - |
| JS609_RS03755 (JS609_00742) | yesF | 731356..732224 (+) | 869 | Protein_687 | NAD-dependent epimerase/dehydratase family protein | - |
| JS609_RS03760 (JS609_00743) | cotJA | 732351..732599 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| JS609_RS03765 (JS609_00744) | cotJB | 732583..732846 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| JS609_RS03770 (JS609_00745) | cotJC | 732861..733430 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 43986.29 Da Isoelectric Point: 5.8590
>NTDB_id=475780 JS609_RS03725 WP_088467558.1 727438..728568(+) (rapC) [Bacillus subtilis isolate ELA2001105]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPIVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALDLAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAKFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPIVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALDLAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAKFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=475780 JS609_RS03725 WP_088467558.1 727438..728568(+) (rapC) [Bacillus subtilis isolate ELA2001105]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATCGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGATTGTGTCTG
ATGAAATTGAGAAAGCCGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAC
CATATTCTTCAGGCCTTGGACATTTATCAAAACCATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACACTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTAGATTTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTAAGTTTTACCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATCGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATATTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGATTGTGTCTG
ATGAAATTGAGAAAGCCGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAC
CATATTCTTCAGGCCTTGGACATTTATCAAAACCATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACACTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTAGATTTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTAAGTTTTACCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.691 |
100 |
0.407 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.523 |
100 |
0.396 |