Detailed information NTG0475765

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JS609_RS01635
• Genome accession: NZ_CP071043
• Coordinates: 297557..298678 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis isolate ELA2001105
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 292557..303678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JS609_RS01610 (JS609_00319)	ycdA	292562..293626 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
JS609_RS01615	-	293649..293780 (-)	132	WP_147797782.1	hypothetical protein	-
JS609_RS01620 (JS609_00320)	ycdB	293954..295375 (+)	1422	WP_147797783.1	YcdB/YcdC domain-containing protein	-
JS609_RS01625 (JS609_00321)	ycdC	295562..296923 (+)	1362	WP_225721864.1	YcdB/YcdC domain-containing protein	-
JS609_RS01630 (JS609_00322)	cwlK	296931..297434 (-)	504	WP_017695036.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
JS609_RS01635 (JS609_00323)	rapF	297557..298678 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
JS609_RS01640 (JS609_00324)	ycdF	298785..299561 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
JS609_RS01645 (JS609_00325)	ycdG	299586..301271 (+)	1686	WP_225721865.1	glycoside hydrolase family 13 protein	-
JS609_RS01650 (JS609_00326)	znuA	301458..302417 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
JS609_RS01655 (JS609_00327)	znuC	302472..303167 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=475765 JS609_RS01635 WP_015715201.1 297557..298678(+) (rapF) [Bacillus subtilis isolate ELA2001105]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=475765 JS609_RS01635 WP_015715201.1 297557..298678(+) (rapF) [Bacillus subtilis isolate ELA2001105]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405