Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H7F36_RS01815 Genome accession   NZ_CP060296
Coordinates   371370..371768 (-) Length   132 a.a.
NCBI ID   WP_187053076.1    Uniprot ID   A0A7G8W0Y5
Organism   Variovorax sp. PAMC28562     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 366370..376768
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F36_RS01800 (H7F36_01800) - 368065..370419 (-) 2355 WP_187053073.1 methyl-accepting chemotaxis protein -
  H7F36_RS01805 (H7F36_01805) - 370455..370988 (-) 534 WP_187053074.1 chemotaxis protein CheW -
  H7F36_RS01810 (H7F36_01810) - 371005..371370 (-) 366 WP_187053075.1 response regulator transcription factor -
  H7F36_RS01815 (H7F36_01815) pilG 371370..371768 (-) 399 WP_187053076.1 PleD family two-component system response regulator Regulator
  H7F36_RS01820 (H7F36_01820) - 371849..372019 (-) 171 WP_187053077.1 rubredoxin -
  H7F36_RS01825 (H7F36_01825) - 372130..373110 (+) 981 WP_187053078.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  H7F36_RS01830 (H7F36_01830) hemL 373135..374427 (+) 1293 WP_187053079.1 glutamate-1-semialdehyde 2,1-aminomutase -
  H7F36_RS01835 (H7F36_01835) - 374496..374750 (-) 255 WP_315971437.1 c-type cytochrome -
  H7F36_RS01840 (H7F36_01840) purH 374925..376532 (-) 1608 WP_187053081.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14668.83 Da        Isoelectric Point: 7.3215

>NTDB_id=475531 H7F36_RS01815 WP_187053076.1 371370..371768(-) (pilG) [Variovorax sp. PAMC28562]
MSTSGSGYKVLVIDDSNTIRRSAEIFLKQGGHEVLLAEDGFDALSKINDHKPHLIFCDILMPRLDGYQTCAIIKRNAHFS
NVPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGLVQQEAP

Nucleotide


Download         Length: 399 bp        

>NTDB_id=475531 H7F36_RS01815 WP_187053076.1 371370..371768(-) (pilG) [Variovorax sp. PAMC28562]
ATGAGCACGAGCGGGTCCGGTTACAAGGTGCTGGTCATCGATGACAGCAACACCATTCGGCGCAGTGCCGAGATCTTCCT
GAAGCAAGGCGGTCATGAAGTGCTGCTCGCCGAAGATGGCTTCGATGCCCTCTCGAAGATCAACGACCACAAGCCGCACC
TCATCTTTTGCGACATTCTGATGCCGCGCCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCATTTCTCA
AACGTCCCTGTCGTGATGCTGTCTTCCAAAGACGGCGTCTTCGACAAGGCGCGCGGCCGCATGGTCGGCTCGCAGGACTA
TCTCACCAAGCCGTTCACCAAGGACCAGTTGCTGCAAGCCGTGCAGCAGTTCGGTCTGGTTCAACAGGAAGCTCCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G8W0Y5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.35

93.182

0.553