Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   H7F31_RS02045 Genome accession   NZ_CP060293
Coordinates   499943..500899 (+) Length   318 a.a.
NCBI ID   WP_187102791.1    Uniprot ID   A0A7G8UPI0
Organism   Paenibacillus sp. PAMC21692     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 494943..505899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7F31_RS02025 (H7F31_02025) - 495614..495823 (-) 210 WP_187102787.1 hypothetical protein -
  H7F31_RS02030 (H7F31_02030) - 496710..497570 (-) 861 WP_187102788.1 S1C family serine protease -
  H7F31_RS02035 (H7F31_02035) - 497688..499223 (+) 1536 WP_187102789.1 AraC family transcriptional regulator -
  H7F31_RS02040 (H7F31_02040) - 499369..499932 (+) 564 WP_187102790.1 nitroreductase -
  H7F31_RS02045 (H7F31_02045) ceuB 499943..500899 (+) 957 WP_187102791.1 ABC transporter permease Machinery gene
  H7F31_RS02050 (H7F31_02050) - 500886..501842 (+) 957 WP_187102792.1 iron chelate uptake ABC transporter family permease subunit -
  H7F31_RS02055 (H7F31_02055) - 501839..502600 (+) 762 WP_108991253.1 ABC transporter ATP-binding protein -
  H7F31_RS02060 (H7F31_02060) - 502698..503759 (+) 1062 WP_187105176.1 siderophore ABC transporter substrate-binding protein -
  H7F31_RS02065 (H7F31_02065) - 503914..505605 (-) 1692 WP_261800274.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 34641.74 Da        Isoelectric Point: 9.7049

>NTDB_id=475489 H7F31_RS02045 WP_187102791.1 499943..500899(+) (ceuB) [Paenibacillus sp. PAMC21692]
MRLWIVIVAAVLLSFVSLFLGAIDIKISDLFNGDTDKIDIFLVSRVPRLMAIILAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDAAKLGILISMLFFTNVTYTQQILFSFAFALAGTFVFMQILDRIKFKDVIFVPLIGIMYGNILSSITTFFAYEADLL
QNISAWLMGSFTLVISGRYELLYISVPALVLAYLYANKFTVAGMGEDFAKNLGLSYKAVMNIGLVLVAIISTTVVLTVGV
IPFLGLIVPNIVSLYLGDNLRKTIPHTAAMGVVFLLICDIIGRIVIHPYEIPVNVTVAVIGSAIFLVMLIRGRAYAKK

Nucleotide


Download         Length: 957 bp        

>NTDB_id=475489 H7F31_RS02045 WP_187102791.1 499943..500899(+) (ceuB) [Paenibacillus sp. PAMC21692]
ATGAGACTATGGATTGTCATTGTCGCCGCGGTCTTGCTGTCTTTCGTATCCTTATTCCTAGGTGCTATCGATATTAAGAT
TAGCGATCTGTTTAATGGAGATACGGACAAGATCGATATTTTCTTAGTTAGCCGAGTGCCTCGTTTGATGGCCATCATTT
TGGCTGGAGCCGGCATGAGCATAGCGGGCTTGATTATGCAGTCATTGAGCCGCAATAAGTTCGTATCTCCTACGACTGCA
GGCACATTAGATGCAGCCAAGCTAGGCATTTTAATATCCATGCTGTTTTTTACGAATGTCACCTACACGCAGCAGATCCT
ATTCTCATTTGCATTTGCTTTGGCGGGAACCTTCGTCTTTATGCAGATCCTGGATCGAATTAAATTCAAGGATGTCATCT
TCGTTCCGCTCATTGGCATTATGTACGGGAATATATTATCGTCCATCACGACGTTTTTCGCTTACGAGGCCGATCTTCTC
CAAAATATTTCGGCATGGCTGATGGGCAGCTTTACCCTTGTTATTTCCGGCCGATATGAGCTGTTATATATAAGTGTTCC
AGCTCTTGTTCTAGCTTATCTATATGCGAATAAGTTTACGGTTGCTGGCATGGGCGAGGATTTCGCAAAAAACTTGGGCT
TAAGCTACAAGGCCGTCATGAACATCGGTCTAGTATTAGTGGCCATCATCTCCACAACGGTGGTGCTGACAGTCGGAGTT
ATTCCGTTCCTTGGTTTGATCGTTCCGAACATTGTTTCGCTCTATCTAGGCGATAATTTGCGCAAAACGATCCCCCACAC
TGCGGCGATGGGCGTAGTTTTTCTGCTCATTTGCGATATTATCGGGCGGATTGTGATTCATCCTTACGAAATTCCGGTTA
ATGTAACGGTAGCGGTGATTGGCAGTGCGATCTTCTTAGTGATGTTGATTAGGGGGAGAGCGTATGCCAAAAAATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(11-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G8UPI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

99.371

0.525