Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | H7F24_RS05525 | Genome accession | NZ_CP060290 |
| Coordinates | 1077786..1080221 (+) | Length | 811 a.a. |
| NCBI ID | WP_048240170.1 | Uniprot ID | - |
| Organism | Bacillus sp. PAMC22265 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1072786..1085221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7F24_RS05510 (H7F24_05510) | - | 1075657..1076121 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| H7F24_RS05515 (H7F24_05515) | - | 1076136..1076693 (+) | 558 | WP_024425862.1 | UvrB/UvrC motif-containing protein | - |
| H7F24_RS05520 (H7F24_05520) | - | 1076698..1077789 (+) | 1092 | WP_024425579.1 | protein arginine kinase | - |
| H7F24_RS05525 (H7F24_05525) | clpC | 1077786..1080221 (+) | 2436 | WP_048240170.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| H7F24_RS05530 (H7F24_05530) | radA | 1080315..1081694 (+) | 1380 | WP_025092231.1 | DNA repair protein RadA | Machinery gene |
| H7F24_RS05535 (H7F24_05535) | disA | 1081697..1082776 (+) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| H7F24_RS05540 (H7F24_05540) | - | 1082930..1084030 (+) | 1101 | WP_024425582.1 | PIN/TRAM domain-containing protein | - |
| H7F24_RS05545 (H7F24_05545) | ispD | 1084044..1084733 (+) | 690 | WP_024425583.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| H7F24_RS05550 (H7F24_05550) | ispF | 1084737..1085213 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 89995.73 Da Isoelectric Point: 6.2469
>NTDB_id=475437 H7F24_RS05525 WP_048240170.1 1077786..1080221(+) (clpC) [Bacillus sp. PAMC22265]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=475437 H7F24_RS05525 WP_048240170.1 1077786..1080221(+) (clpC) [Bacillus sp. PAMC22265]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATAGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCTAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGAGTCGCTGCCCGTGTATTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACCGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATTGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACACTGGATATGGGAACTGTTGTAGCTGGGACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGCCAGGCAGGAAATATCATTCTCTTTATCGACGAGCTTCATACACTCATTGGTGCTGGTGGAGCAGAGGGCG
CGATTGATGCGTCTAATATCTTGAAGCCATCCTTAGCACGTGGTGAGCTTCAATGTATTGGAGCGACAACGTTAGATGAG
TACCGTAAATACATTGAAAAGGACGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCGGTGAAGCTGTCTGACCGTTATATTTCTGACCGATTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACGACACCGCCTAACCTAAAAGAGTTAGAGCAAAAGTTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAACAGCGTTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTT
GTTTCCAGCTGGACGGGAGTACCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAACATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTCGCTGTAGCGAAAGCGGTGAGACGTGCACGTGCTGGCCTGAAAG
ATCCAAAACGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTTGGGTCACCTCCAGGCTATGTGGGTTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCTCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTC
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTTGATCTTGAGTACGGTGCGCGTCCGTTAAGACGAGCGATTCAAAAGCATG
TAGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGGAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATAGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCTAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGAGTCGCTGCCCGTGTATTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACCGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATTGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAGCCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACACTGGATATGGGAACTGTTGTAGCTGGGACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGCCAGGCAGGAAATATCATTCTCTTTATCGACGAGCTTCATACACTCATTGGTGCTGGTGGAGCAGAGGGCG
CGATTGATGCGTCTAATATCTTGAAGCCATCCTTAGCACGTGGTGAGCTTCAATGTATTGGAGCGACAACGTTAGATGAG
TACCGTAAATACATTGAAAAGGACGCTGCGCTTGAACGACGTTTCCAGCCAATTCAAGTAGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCGGTGAAGCTGTCTGACCGTTATATTTCTGACCGATTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACGACACCGCCTAACCTAAAAGAGTTAGAGCAAAAGTTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAACAGCGTTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTT
GTTTCCAGCTGGACGGGAGTACCTGTTTCGAAAATTGCTCAAACGGAGACAGATAAGCTTCTGAACATGGAACAATTGCT
CCACTCTCGTGTGATCGGGCAGGATGAAGCCGTTGTCGCTGTAGCGAAAGCGGTGAGACGTGCACGTGCTGGCCTGAAAG
ATCCAAAACGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTTGGGTCACCTCCAGGCTATGTGGGTTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCTG
TCGTTCTTTTAGACGAGATTGAAAAGGCTCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTC
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTTGATCTTGAGTACGGTGCGCGTCCGTTAAGACGAGCGATTCAAAAGCATG
TAGAAGATCGACTTTCTGAGGAGCTTCTGAAGGGGAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.556 |
100 |
0.45 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.229 |
87.916 |
0.433 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
52.868 |
79.531 |
0.42 |